Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3640 |
Symbol | |
ID | 5834572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4017920 |
End bp | 4018966 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641369433 |
Product | hypothetical protein |
Protein accession | YP_001641089 |
Protein GI | 163853046 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0445964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTTC GTATCAACCG CCTGGACCCG CATGTGCCGG ATCCCGTCGA GAGCCGCCGG CGCGCCGCCG GGCGGGTCGT GCGCTTTGCC TACGCCGTGG GCATCTTCGG CGTCCTTGGT TTCTTTGTCG TCTATTTCGG CGCACCCTTC GTCTTCCTCA GCGGTCCCGG AATCGTCTCC TCCCCGCGCC ACGTGCTGTC GCTTCCCTTC ACCGTGCAGG TCAACCGCAT GAACGTGAGG CCCGGCTCCG CCGTGAAGGC CGGCGATGAA ATCGGACAGG TGTACTCGCC CGAGCAGGAG ACCATCGTCG CGACCTACAT GCGCGCGCTG TCGGATATCG CCGGCCGCAG CGCCGAACTG CGCGTCAAAG CGCGCGTAGC CGCGGAATCG CTCGAAGCGG CGCGGGCGTA TCAGCGCGAA ACCGAGACGG CTCTGGAACG CATCGCTGCG ATGGCCAGCA CGACGACGAC ATTTCGCGTC CAGATTCTCC GTGAGCGCTC GCTCGCGAAC AAGGACGTCA TCTCGCAGCA GGCCGAGGCC GAGGAGGCCA CGAAACAGCT TGTCTCTCTC GATGCGTTCA GCAAACAGAT CCACGAGCAG CTAGACGAGG TGAAGCAAAA CTTCAGATCC GGTCGGGTAT TCGCTCTCGT CGGCGGCATC ATCTCGACAG GACTGGCCCA GACCGGCCAG TCACTCGTCG CCGGCGCGCC GATCGCTGAC ATCCTCAACC CAAACGATGT CTATGTTGAC TGGTATATCC CCAACGAACG ATTAATCGAT CCTCGGATTG GAAATGATGT ATTTGTGCTT TTCGGACACC GCCGCATTCC CGGAAAGATC ACAGAGATTC TGCCCGTTTC TGCCTTATTC GGAAGCTCAC AGCAGCTCAC CTTACGGGAT CGTCCGGCGA CTCAAATTGC TCGCATACGT TTCACCTCTG ATGCGTCAAC GCCAGCCCTT AACTCTACAG TATGCGTTCA TATGCATTAC AGCAAAATTT CAACAGATAT CTCCCGTTCA CTGATAAAAA TTTGTGGCCT AGATTGA
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Protein sequence | MNVRINRLDP HVPDPVESRR RAAGRVVRFA YAVGIFGVLG FFVVYFGAPF VFLSGPGIVS SPRHVLSLPF TVQVNRMNVR PGSAVKAGDE IGQVYSPEQE TIVATYMRAL SDIAGRSAEL RVKARVAAES LEAARAYQRE TETALERIAA MASTTTTFRV QILRERSLAN KDVISQQAEA EEATKQLVSL DAFSKQIHEQ LDEVKQNFRS GRVFALVGGI ISTGLAQTGQ SLVAGAPIAD ILNPNDVYVD WYIPNERLID PRIGNDVFVL FGHRRIPGKI TEILPVSALF GSSQQLTLRD RPATQIARIR FTSDASTPAL NSTVCVHMHY SKISTDISRS LIKICGLD
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