| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3463 |
|---|
| Symbol | |
|---|
| ID | 5832432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3843855 |
|---|
| End bp | 3844397 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641369261 |
|---|
| Product | carbohydrate kinase |
|---|
| Protein accession | YP_001640919 |
|---|
| Protein GI | 163852876 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3265] Gluconate kinase |
|---|
| TIGRFAM ID | [TIGR01313] carbohydrate kinase, thermoresistant glucokinase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.97771 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.772653 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTC CCCGATCCTC CGCCCCGACC GTCCTCGTGG TGATGGGCGT CTCGGGCTCC
GGCAAGAGCA CGGTGGCCGC GCTGCTGGCC GAGCGGCTCG GCTGGACCTT CGCTGACGGC
GACGATTTCC ACACGCCCGA GAGCATTGCC CGGATGCGGG ACGGGCACCC GCTCGACGAC
GCGGCGCGTC AGCCCTGGCT CGGCCGCATC CGCGCCTGGA TCGACGCACG AATCGCGGCC
GGAGAGAACG CCGTGGTCGC CTGCTCGGCC CTCAAGCGGG CCTACCGCCG CGCCCTGATC
GGCGATCCCC AGCGGGTGCG CATCGTCTTT CTCGAAGGGA GCCGGACGGT CATCCAAGAC
CGGATCCGGG CACGGCACGG CCATTTCATG CCGGCCTCGC TCCTCGACAG CCAGCTCGCC
GCCCTCGAAC CACCCGGCCC GGAGGAAGAT CCGATCACCG TCGGCATCGA GGAGGGGCCC
GACGCCATCG TCGCGGCGGT CGCCACCCGT CTCGACATCC CCGCGGGCGA CATCTGCGCA
TAG
|
|---|
| Protein sequence | MTVPRSSAPT VLVVMGVSGS GKSTVAALLA ERLGWTFADG DDFHTPESIA RMRDGHPLDD
AARQPWLGRI RAWIDARIAA GENAVVACSA LKRAYRRALI GDPQRVRIVF LEGSRTVIQD
RIRARHGHFM PASLLDSQLA ALEPPGPEED PITVGIEEGP DAIVAAVATR LDIPAGDICA
|
|---|
| |