Gene Mext_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3438 
Symbol 
ID5833295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3817238 
End bp3818464 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content73% 
IMG OID641369237 
ProductABC-2 type transporter 
Protein accessionYP_001640895 
Protein GI163852852 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0748672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCGG CGGCATTCCG GGTGATGTGG CTCTCGCTCG TGCGCGACCG CGCGGCGCTG 
ACCATGGCCT TCGTGCTGCC CACCGTCATC TTCGCGATCT TCGCGGCGAT CTTTTCGGGC
GCGATCGGCG ACCGCATCCG CATCCATCTC GGGCTCGCCG ACCTCGCGGG CACCGCCACC
ACGCAGCGCC TCGTGACGGC GCTTGAGGCC GAGCCGTCCT TGCGCATCGC GCGCCTGGAC
GTGGCGGACG AGGCGGCGGC CGTCCGCGCC GTGCGCCGGG GCGAGGTCGA TGTGGCCCTG
GTGCTGCGCA GCGACCTCGC AGCACCCGCT GGCCCCGACA AGGCAGGCCA GGACAAGGGG
AGCGCGGCGG CGAGCCAGCC GGTGCTGCTG ATCGAGAGTC CGTCGCGGGC GCTCGCCACA
CCGATCGCGC TGGGCCAGCT CCAGCGTGCC CTCAACGACG CGCTGCCCGA CGTGGTGCTC
TCGCGCATCG TCGCGGACGT GGAACGCTCC GGCAAGATCG GGCCGGACGA GCGCGCGTTC
CTGGACGAGG CCTTCGCTGA GCAGCGAGCG AAGAAAGAGC CGTTCTCTTT CACTCGTCTC
GTCGAGACCC GCACCACTGC GAGCGGGCGC GGCAACGAGC GGGTGAGCTA CTATGCGGGC
GCCATCGCCG CCGTGTTCCT GCTGTTTGCG GCGATGCAGG GGGCGCTTTC CCTGGTGGAC
GAGCGCGAGG GCGGGCTGGC CGATCGCCTC GCCGCCGGCC CCGGCGGCCT GCCGGTGATC
GTGCTGGGCA AATTCCTGTT CCTGCTCGGC CAGGGCGTGG TCCAGGCCGG GCTGATCTTC
TCCGCCGCCG CTCTGCTGCA CGGCGTCGAT GTGTCTGGCC ACTGGATCGG CTGGCTCGTC
ACCTCGATCC TCGTCTCGGC CATGGCGGCT GGCCTCGCGC TCGCCGCCTG CTCGCTTTCG
GCCACACGTC AGCAGGCGCA TCTGGCCGCG ACCTTCGGCG TGCTGCTGCT CTCGGCGGTG
GGCGGCAGCA TGGTGCCCCG CTTCCTCATG CCCCCCTGGC TGCAGCAGGC CGGCTGGCTC
ACGCCCAACG CCTGGGCGAT CGAGGCCTAT CAGGCGGCCC TCGGCGAGGG CGCGGCGGCG
GCGCTACCGG CCTGGGGCGT GCTGGCGGCC CTGGCGGCCG TGGGGCTGGG GGTCGCGGTC
GGCGTGGTGG GCCGGAGAAC GGTCTGA
 
Protein sequence
MIAAAFRVMW LSLVRDRAAL TMAFVLPTVI FAIFAAIFSG AIGDRIRIHL GLADLAGTAT 
TQRLVTALEA EPSLRIARLD VADEAAAVRA VRRGEVDVAL VLRSDLAAPA GPDKAGQDKG
SAAASQPVLL IESPSRALAT PIALGQLQRA LNDALPDVVL SRIVADVERS GKIGPDERAF
LDEAFAEQRA KKEPFSFTRL VETRTTASGR GNERVSYYAG AIAAVFLLFA AMQGALSLVD
EREGGLADRL AAGPGGLPVI VLGKFLFLLG QGVVQAGLIF SAAALLHGVD VSGHWIGWLV
TSILVSAMAA GLALAACSLS ATRQQAHLAA TFGVLLLSAV GGSMVPRFLM PPWLQQAGWL
TPNAWAIEAY QAALGEGAAA ALPAWGVLAA LAAVGLGVAV GVVGRRTV