Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3438 |
Symbol | |
ID | 5833295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3817238 |
End bp | 3818464 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641369237 |
Product | ABC-2 type transporter |
Protein accession | YP_001640895 |
Protein GI | 163852852 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0748672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGCGG CGGCATTCCG GGTGATGTGG CTCTCGCTCG TGCGCGACCG CGCGGCGCTG ACCATGGCCT TCGTGCTGCC CACCGTCATC TTCGCGATCT TCGCGGCGAT CTTTTCGGGC GCGATCGGCG ACCGCATCCG CATCCATCTC GGGCTCGCCG ACCTCGCGGG CACCGCCACC ACGCAGCGCC TCGTGACGGC GCTTGAGGCC GAGCCGTCCT TGCGCATCGC GCGCCTGGAC GTGGCGGACG AGGCGGCGGC CGTCCGCGCC GTGCGCCGGG GCGAGGTCGA TGTGGCCCTG GTGCTGCGCA GCGACCTCGC AGCACCCGCT GGCCCCGACA AGGCAGGCCA GGACAAGGGG AGCGCGGCGG CGAGCCAGCC GGTGCTGCTG ATCGAGAGTC CGTCGCGGGC GCTCGCCACA CCGATCGCGC TGGGCCAGCT CCAGCGTGCC CTCAACGACG CGCTGCCCGA CGTGGTGCTC TCGCGCATCG TCGCGGACGT GGAACGCTCC GGCAAGATCG GGCCGGACGA GCGCGCGTTC CTGGACGAGG CCTTCGCTGA GCAGCGAGCG AAGAAAGAGC CGTTCTCTTT CACTCGTCTC GTCGAGACCC GCACCACTGC GAGCGGGCGC GGCAACGAGC GGGTGAGCTA CTATGCGGGC GCCATCGCCG CCGTGTTCCT GCTGTTTGCG GCGATGCAGG GGGCGCTTTC CCTGGTGGAC GAGCGCGAGG GCGGGCTGGC CGATCGCCTC GCCGCCGGCC CCGGCGGCCT GCCGGTGATC GTGCTGGGCA AATTCCTGTT CCTGCTCGGC CAGGGCGTGG TCCAGGCCGG GCTGATCTTC TCCGCCGCCG CTCTGCTGCA CGGCGTCGAT GTGTCTGGCC ACTGGATCGG CTGGCTCGTC ACCTCGATCC TCGTCTCGGC CATGGCGGCT GGCCTCGCGC TCGCCGCCTG CTCGCTTTCG GCCACACGTC AGCAGGCGCA TCTGGCCGCG ACCTTCGGCG TGCTGCTGCT CTCGGCGGTG GGCGGCAGCA TGGTGCCCCG CTTCCTCATG CCCCCCTGGC TGCAGCAGGC CGGCTGGCTC ACGCCCAACG CCTGGGCGAT CGAGGCCTAT CAGGCGGCCC TCGGCGAGGG CGCGGCGGCG GCGCTACCGG CCTGGGGCGT GCTGGCGGCC CTGGCGGCCG TGGGGCTGGG GGTCGCGGTC GGCGTGGTGG GCCGGAGAAC GGTCTGA
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Protein sequence | MIAAAFRVMW LSLVRDRAAL TMAFVLPTVI FAIFAAIFSG AIGDRIRIHL GLADLAGTAT TQRLVTALEA EPSLRIARLD VADEAAAVRA VRRGEVDVAL VLRSDLAAPA GPDKAGQDKG SAAASQPVLL IESPSRALAT PIALGQLQRA LNDALPDVVL SRIVADVERS GKIGPDERAF LDEAFAEQRA KKEPFSFTRL VETRTTASGR GNERVSYYAG AIAAVFLLFA AMQGALSLVD EREGGLADRL AAGPGGLPVI VLGKFLFLLG QGVVQAGLIF SAAALLHGVD VSGHWIGWLV TSILVSAMAA GLALAACSLS ATRQQAHLAA TFGVLLLSAV GGSMVPRFLM PPWLQQAGWL TPNAWAIEAY QAALGEGAAA ALPAWGVLAA LAAVGLGVAV GVVGRRTV
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