| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3373 |
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| Symbol | |
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| ID | 5834932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 3738378 |
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| End bp | 3739838 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641369172 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_001640830 |
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| Protein GI | 163852787 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.389462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAGC GAATGACACA GACACGGGCC AGACGCCGCC GCGGCGTGAG AATCGGAACG
GCCGGAGCCC TGCTGGCGGC AAGCCTGACC ACGGCGACCG GCGTCTCCGC GCAGCAGCCC
TCGCCGGTGG GCCAGTTCAA CGATCAAACC CAGCCGCGCA CCGATCCGCG CATCGCCGAG
AAACCCAGCG ATCCCGTCCG CGTCGGCCCG CTGGCGCCCT GGGCCACCCA CATGGCCGAG
CGCGGGCTCA CCTTCGACAT CAACATCTAC AACTTCTACC AGGCCAACCC CTCGGCTGGC
CTGCGCACGG GAGAGCAGTC GAACTCGACC TATTTCGTCC TCTCCATGAC CGCGGACATG
CAGCGCATCG CCAACATCAG TGGCGGCACC ATCAAGTTCA CGCAAACCTT CTTCGGCAAC
GTCCGCAACC TCAACATGGC CGCCGATATC GGCGACACCA CGGTCGGCTA CCAGCCGCCG
TTCAACCCCA ACAACAACCG CCTGTCGCTG CTCACCTATC AGCAGAAGCT GCTTGATGAC
CGCCTCGTCA TCGAGGTCGG CCGCACCCAC CCCGATCGCT ACTACGGCCT GCCGCCGTGC
AACTCGATCA ATTCCTGCTT CCAGGACCTG TTCTACATCA ATGCCGGCTT CACCTCGCCG
CTCTACGCGG TCTGGGGCGC GAACGCCGCC TACCAGCTCT CGCCCACCAG CTACGTCCAG
GCCGGCGCCT TCTCGGTGAA CCCCGGCACC AACGCGCTGT CGGGCTACGA TTTCGGCTAC
GAGCGCCTCT CGGGCGCGCT GGTGATGACC GAGATCGGCA CCAAGACCGA CTACACCATG
ACCGCCTATC CCGGCCGCGC CTCGCTCACC GGCTTCTTCA ACACGGCCGA TCACGACGAC
AACTTCAAGA CGGTGTTCGG CACCTCGAAG GGCCTCAACC CCGGCGCTCC GGTGCTGCAG
AAATCGGGCA CGTCCGGCAT CGTGCTCACC GGCACGCAGA CGGTCTGGCG CGCCGACGGT
GGCCTGGTGG CCAACCCGCA CCCGACGTCG ATCTCGCTCT ATACCGGCAC GGGCTACTCG
TTCGACCCGA CGGTGCCGAT CCGCTTCAAC TCGTTCGTCG GCGTGCGTCT CGATGCGCCC
GACCAGAGCC GGCCCAACGA CAGCTACGGG CTGAAGATGA ACTGGCAGCG CTTGTCGGAG
AACTACACGC AGTTCCTCTC TGACGCGAAC TTCATCTCGG GCGGCTCGGG CGCCCCGTAT
TCGCGCGACA AGTTCGTGTT CGAGGCCAAC GCGCATTTCG ATGTCGGCGC GGGTGTGATC
ATCGAGCCGG TGGTTCAGTA CGTGGTCAAC CCGAACTCGT TCTGGAACCC CTTCACCGCG
CGGCGCGCCA AGGACGGCTT CTACGCCGGC GCCACCCTCG TCGTCCCGCT CGGCACCCTG
CTCGGTCTCG CTCCGGGCTA G
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| Protein sequence | MLERMTQTRA RRRRGVRIGT AGALLAASLT TATGVSAQQP SPVGQFNDQT QPRTDPRIAE
KPSDPVRVGP LAPWATHMAE RGLTFDINIY NFYQANPSAG LRTGEQSNST YFVLSMTADM
QRIANISGGT IKFTQTFFGN VRNLNMAADI GDTTVGYQPP FNPNNNRLSL LTYQQKLLDD
RLVIEVGRTH PDRYYGLPPC NSINSCFQDL FYINAGFTSP LYAVWGANAA YQLSPTSYVQ
AGAFSVNPGT NALSGYDFGY ERLSGALVMT EIGTKTDYTM TAYPGRASLT GFFNTADHDD
NFKTVFGTSK GLNPGAPVLQ KSGTSGIVLT GTQTVWRADG GLVANPHPTS ISLYTGTGYS
FDPTVPIRFN SFVGVRLDAP DQSRPNDSYG LKMNWQRLSE NYTQFLSDAN FISGGSGAPY
SRDKFVFEAN AHFDVGAGVI IEPVVQYVVN PNSFWNPFTA RRAKDGFYAG ATLVVPLGTL
LGLAPG
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