Gene Mext_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3197 
Symbol 
ID5832918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3549907 
End bp3550317 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content67% 
IMG OID641368997 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_001640655 
Protein GI163852612 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.114465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.694875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCG TCACCGTCGA AGACTGCATC GAGAAGGTCG AGAACCGCTT CGAGCTGGTC 
CTGCTCGCCA GCCACCGGGC GCGCCTGCTC GCCGCCGGCG CCCCGCTGAC CGTGGAGCGC
GACCGCGACA AGAACCCCGT CGTGGCCCTT CGCGAGATCG GCGACGAGAC CATCACGGCG
GAAGATCTCA AGGAGCAGCT CATCCACTCG ATGCAGAAAT ACGTCGAGGT GGACGAGCCC
GAGGCCGAGA CCGTGCCGCT CCTGTCGAGC TCGCCCGCCG CTGCCGCGGT GGCGCCCCAG
TCCTCCTCGG ACGACAAGAA CGTGCAGTTC GACTTCATGA GCGAGGAGGA TCTCCTCCGC
GGTCTCGAGA ACCTCGCACC GCCGACCGAG ACCGACGACG AGGGCGAGTA A
 
Protein sequence
MARVTVEDCI EKVENRFELV LLASHRARLL AAGAPLTVER DRDKNPVVAL REIGDETITA 
EDLKEQLIHS MQKYVEVDEP EAETVPLLSS SPAAAAVAPQ SSSDDKNVQF DFMSEEDLLR
GLENLAPPTE TDDEGE