| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3109 |
|---|
| Symbol | |
|---|
| ID | 5835060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 3457971 |
|---|
| End bp | 3458846 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641368909 |
|---|
| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
|---|
| Protein accession | YP_001640568 |
|---|
| Protein GI | 163852525 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.187089 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGTCC TCACCACCCG CGCTCCGGCC AAGATCAACC TGACCCTGCA CATCCTCGGC
CGCCGGCCCG GCGACGGCTA CCATGCGCTG GAGAGCCTCG TGGCCTTCGC CGACGTGGCG
GACACGCTGG AACTGGTGCC GGGCCCTGAT CTGACGCTGG ACATCTCTGG CCCCACCGCC
GGGCCGGCGG GACCGCTCGA CGACAACCTC GTCCTGCGCG CCGCCCGCCA CCTCGCCGCA
GGCGTGGACG GCCTGAGGCT CGGCGCCTTC CGCCTGCACA AGCAACTGCC CGTGGCGGCG
GGGATCGGCG GCGGCTCGTC GGATGCGGCC GCCGCCCTGC GGCTGCTGGC CGAGCTGAAC
GGGCTCGCCC TTGATTACCC GGCGGTCATC GCCGCGGCGC GGGCGACCGG CGCCGACGTG
CCGGTCTGCC TCGATCCGCG GGCGCGGATG ATGCGCGGCG CGGGCGAGGA AATCGGACCG
GTGCTCGGCC TCGCATCGCT GCCGGCGGTG TTGGTCAATC CCGGCGTGCC GGTCTCGACC
GCGCCGGTCT TCAAGGCGCT CGGCCTCGCG GTCGGTCAGC AGCTCGACGG GGCGGAGCAT
CCGGTCGTCG GGGCTAGTCT CGATGCGGAC GCCGTGCTCG GCGTCATCGC CCCCGCTCGC
AACGATCTCG AGGCGCCGGC CCTCACCGTC GCCCCGGTGA TCGGCGAAGC GCTGGGGCTG
CTGTGGGCTC AGGCCGGGTG CCGGCTTGCG CGGATGTCGG GCTCCGGGGC CACCGTGTTC
GCGATTTTTT CCGACGACGG GGCGGCGGAG ATGGCGGCCG GAGCGATCCG CGCCGCTCAG
CCCGGCTGGT GGGTCGAGCC GACGCGGCTC GCCTGA
|
|---|
| Protein sequence | MSVLTTRAPA KINLTLHILG RRPGDGYHAL ESLVAFADVA DTLELVPGPD LTLDISGPTA
GPAGPLDDNL VLRAARHLAA GVDGLRLGAF RLHKQLPVAA GIGGGSSDAA AALRLLAELN
GLALDYPAVI AAARATGADV PVCLDPRARM MRGAGEEIGP VLGLASLPAV LVNPGVPVST
APVFKALGLA VGQQLDGAEH PVVGASLDAD AVLGVIAPAR NDLEAPALTV APVIGEALGL
LWAQAGCRLA RMSGSGATVF AIFSDDGAAE MAAGAIRAAQ PGWWVEPTRL A
|
|---|
| |