| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3012 |
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| Symbol | |
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| ID | 5835397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 3360383 |
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| End bp | 3361444 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641368812 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001640472 |
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| Protein GI | 163852429 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.352634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTGT TTGCGCCTGA CCCTTTCGCC GCCAGCGCGG CGGACCGCTC TGCCTGCCGG
GCCGCGATCC GCGCCGGCTC CAAGAGCTTC TTCGCGGCCT CGCTGCTGCT GCCGCCCTCA
GTGCGGGTCT CGGCCTACGG CCTCTACGCC TTCTGCCGCC TTTCCGACGA TGCGGTGGAC
GAGGCGGGGG GCAACCGTGC TGCGGCCCTC GCCCGCCTGG AACGACGGCT GACAGCGGCC
TGTGCCGGCC GGCCCGACAA CCACCCGGCC GACCGGGCGC TCGCCGAGGT GCTCGCCCGC
CACGCCATCC CGGAAAAGCT GCCGCGGGCG CTGCTCGAAG GGTTGGCCTG GGACACGCAA
GGCCGGCGCT ACGACACCCT GTCGGAGCTG GCCGCCTATG CCGCCCGGGT CGCGGGCGCG
GTCGGGGCGA TGATGACACT GGTGATGGGG GTGCGCGACG GCCCCGCGCT CGCCCGCGCC
TGCGATCTCG GCGTGGCCAT GCAATTCACC AACATCGCCC GCGATGTCGG CGAGGATGCC
CGCGCCGGGC GCCTCTACCT GCCTCGCGAG TGGCTCGACG CGGCCGGCAT CGACCCGGAC
GCCTTCCTCG CCGAGCCTCG GCTCGGCCCC AGCCTGCAAC GGGTGGTGGC CGAGCTGCTG
GCGGCGGCCG ACGAACTCTA CGCCCGCGCC GAACCCGGCA TCGCCGCGCT CCCGTTGAGC
TGCCGCCCGG CGATCCGCGC CGCCGGCCTG ATCTACGCGG AGATCGGCCG TGCCGTGGAG
GCGAACGAGC TCGATTCGGT CACGCGCCGC GCCCGCGTCA CCGGCGCGCG CAAGGCCGGG
CTTCTGGCCA CCGCGATCCT GCCCGCGGGC GGCGGCCAGG GACTATCGGC GCCGCCATTG
CCCGAGACCG CCTTCCTCGT GGAAGCCGTG ACGCACCATC CGGTCCCAGC CGCGCGGCGC
TTGCCACCGT GGTGGAACGT GTCGGGGCAG GTCGTGCGGG TGCTCGACCT GATCGAGGTG
CTGGAGGAGC GCGACGCCTT CCGCCGCTCG GCCGCGTCGT AA
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| Protein sequence | MPVFAPDPFA ASAADRSACR AAIRAGSKSF FAASLLLPPS VRVSAYGLYA FCRLSDDAVD
EAGGNRAAAL ARLERRLTAA CAGRPDNHPA DRALAEVLAR HAIPEKLPRA LLEGLAWDTQ
GRRYDTLSEL AAYAARVAGA VGAMMTLVMG VRDGPALARA CDLGVAMQFT NIARDVGEDA
RAGRLYLPRE WLDAAGIDPD AFLAEPRLGP SLQRVVAELL AAADELYARA EPGIAALPLS
CRPAIRAAGL IYAEIGRAVE ANELDSVTRR ARVTGARKAG LLATAILPAG GGQGLSAPPL
PETAFLVEAV THHPVPAARR LPPWWNVSGQ VVRVLDLIEV LEERDAFRRS AAS
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