| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2908 |
|---|
| Symbol | |
|---|
| ID | 5832459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3252296 |
|---|
| End bp | 3253753 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641368708 |
|---|
| Product | aminotransferase class-III |
|---|
| Protein accession | YP_001640368 |
|---|
| Protein GI | 163852325 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.597811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGGCCGT TAGTGTGGCG AGGCTGCCGG CGCGCCCCGT CGGCGAAGAC TTCCGGCTGC
CGCATCATGC TGTCGAACAT CGCCGCCCGC GACGTCGAGA CCCTGATCCA TCCCTATACC
AATCTTTCCA CCTTCCGGGA GACGGGCCCG CTGGTGCTGG AGCGAGGCCA CGGCGTCTGG
GTCTACGACA CGGACGGGCG CCCGTATCTT GAGGGCATGG CTGGGCTGTG GTGCACGGCC
CTGGGCTACG GCAACGAGGA ATTGGTCGAG GCCGCCGCCG AGCAGATGGG CCGGCTGCCC
TTCGCGCACC TGTTCTCGGG CCGCAGCCAC GATCCGGCGA TCGAGCTGGC CGAGACGCTC
AAGGAGCTGA TGCCGGTCCC GACCTCGAAG ATCTTCTTCA CCTCTTCGGG CTCCGAGGCC
AACGACGCGC AGGTCAAGCT ACTCTGGTAC ATGAACAACG CGCTGGGGCG CCCGCGCAAG
AAGAAGATCA TCGCCCGCAG GAAGGGCTAT CACGGCGTCA CGGTGGCGAC CGCTTCGCTC
ACCGGCCTTC CCGCCAACCA CGCCGACTGG GACCTGCCGA TCGACGGCTT CCTCCACACC
GCCTGCCCGC ACCATTACCG CGGCGCCGAG GCGGGCGAGA CCGAGGAAGC CTATTCGCAG
CGTCTCGCGG CAGAACTCGA AGCGCAGATC CTCGCCGAGG ATCCGGACAC CGTGGCCGCC
TTCTTCGCAG AACCGGTGAT GGGAGCGGGC GGGGCCATCG TGCCGCCGGC CGGCTATTTC
CCGGCGATCC AGGCGGTGCT CGACCGCTAC GACGTGCGCC TCGTCGCCGA CGAGGTGATC
TGCGGTTTCG GCCGGCTCGG CACGTGGTTC GGCAGCGAGG CGCTCGGCAT GCGCCCGAAC
ACCCTCTCCT TCGCCAAGGC GCTGACCTCC GGCTACCTCC CGCTCGGCGG CATCAGCATC
GACGAGCCGC TCTACCGGGC GATGCTCGAC GAGAGCGTCA AGCTCGGCGG CTTCGGCCAC
GGCACCACCT ATTCCGGGCA TCCCGTCGCC TGCGCCGTGG CCAACCGCAC GCTGCACATC
TACCGGCGCG ACCGTATCGT CGAGCGGGCC GGGGAGCGTG CGCCGCATTT CCAGGCGGCC
CTGGCCCGGC TGGCCGACCA TTCCCTCGTC GGCGAGGCGC GGGGCATGGG GCTGATCGGC
GGCATCGAGA TCGTGGCCGA CAAGCCCTCG AAGCGTCAGT TCGAGCCTAA GGCGGCGGTG
GCGGCGCGCT GTGTCGCCTT CGCGCAGGAC GAGGGGCTGA TCGTGCGCTT CCTGGCCGGC
GACCGCATCG CCGTCTGCCC GCCGCTGGTG ATCGAGCCCG ACGAAATCGA CACCTTGTTC
GAGCGCCTAA CCCGCGCCCT GGATCGCACC GCAACCTGGA TCGCTCAGGA GGGTCTGGAA
CCGATGCCGG CCCCATAA
|
|---|
| Protein sequence | MRPLVWRGCR RAPSAKTSGC RIMLSNIAAR DVETLIHPYT NLSTFRETGP LVLERGHGVW
VYDTDGRPYL EGMAGLWCTA LGYGNEELVE AAAEQMGRLP FAHLFSGRSH DPAIELAETL
KELMPVPTSK IFFTSSGSEA NDAQVKLLWY MNNALGRPRK KKIIARRKGY HGVTVATASL
TGLPANHADW DLPIDGFLHT ACPHHYRGAE AGETEEAYSQ RLAAELEAQI LAEDPDTVAA
FFAEPVMGAG GAIVPPAGYF PAIQAVLDRY DVRLVADEVI CGFGRLGTWF GSEALGMRPN
TLSFAKALTS GYLPLGGISI DEPLYRAMLD ESVKLGGFGH GTTYSGHPVA CAVANRTLHI
YRRDRIVERA GERAPHFQAA LARLADHSLV GEARGMGLIG GIEIVADKPS KRQFEPKAAV
AARCVAFAQD EGLIVRFLAG DRIAVCPPLV IEPDEIDTLF ERLTRALDRT ATWIAQEGLE
PMPAP
|
|---|
| |