| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2762 |
|---|
| Symbol | |
|---|
| ID | 5832752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3093878 |
|---|
| End bp | 3095713 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641368562 |
|---|
| Product | single-stranded-DNA-specific exonuclease RecJ |
|---|
| Protein accession | YP_001640224 |
|---|
| Protein GI | 163852181 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
|---|
| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCC GCGTGACCGC CGCCATGCTC ATCGATCCGT CCTCGGACCT CCCGCGTCCG
TTCCTCGACG TCACCGCCTC TGCGCTCGGG CGGCCGTGGC GCGAGCGCTG CGGCGATCCC
GGCCTCCAAG CGCTCGCCGT GACGATGACG CAGGCCTATG GCCTGCCGGA TCTGCTCGCG
CGCGTCCTGG TCGGGCGCGG CGTACGGCCG GCGGAGGCGG ACGCCTATCT CGCCCCGCGT
CTGCGCGACC TGATGCCGGA CCCGTCGGTG CTCGTGGATA TGGAAGCGGC GGTCGAGCGG
CTGGCCTATG CCGTGCGCGC CCGCGAAGCG GTGGCAATCT TCGGCGATTA CGACGTGGAC
GGAGCGTCGA GCGCGGCCCT GCTCGCCGGC TATCTCCGGG CGCTCGGCGT GCCGGTGCGC
ATCCATATTC CCGACCGCAT CACGGAAGGG TACGGCCCCA ATGTCGGCGC CGTCACGATG
CTGCGCGAGG AGGGCGCGGG CCTGCTCGTC TGCGTCGATT GCGGCACTGC CGGCCACGAG
CCGCTGGCCG CGGCCGCGGC GCTGGGCCTC GACGTGATCG TGCTCGACCA CCACGGCGCG
CCGGAGGAGC TTCCGCAGAC ACGGGCCCTG GTCAATCCGA ACCGTCTCGA CGACCTGTCC
GGCCTCGGCC ATCTCTGCGC GGCGGGCGTC GTCTTCATGA CCCTCGTCGC GCTGGCCCGC
CGACTGCGGC GGGACGGTGT CTTCGCAACA TCCACCGAGC CGCGCCTCAC CGACTTCCTC
GATCTCGTGG CGCTTGCCAC CGTCGCCGAC GTGGTGCCGC TCACCGGTCT CAACCGGGCT
TTCGTCGTCC AGGGACTCGC GGTGATGCGC GGGCGCGGGC GTCCGGGATT AGCCGCGCTG
CTCGACGCGG CCGGGCTGAG CGAACCGCCG GAAGCGTGGC ATCTCGGCTT TCTCGTCGGG
CCGCGCATCA ATGCCGGCGG GCGGATCGGC GATGCCGGTC TCGGCGCGCG GCTGCTCACC
ACCACCGACC CGATGGAGGC CCGTCGCATC GCCGACGAAC TCGATCGGCT CAACCGTGAG
CGGCAGGCCA TCGAGGCGCA GGCGGTCGCC GAGGCCGAGG CGGAGATGGA TGCCCACCTC
ACACGCGATC CGGACCGTCC GGTCCTGATC GCCGCCTCGC CCGAATGGCA TCCCGGCATC
GTCGGCCTCA TCGCCGCCCG GCTCAAGGAG CGGTTCGGCC GGCCAGCCTT CGCCTTCGCG
GTCAAGCCCG ATGGCAGCGC CGTCGGCTCC GGCCGCTCCG TCGTCGGTGC GGATCTCGGC
GGTGCCGTGC GCGGCGCGGT CGAGGCGGGG CTCGCGGTCA AAGGCGGCGG GCATGCCATG
GCCGCGGGCG TGACCCTCCC GCCCGGAGGC CTCGCCGCCT TCGGGGACAG TCTCACCCAC
GATCTCGTCG AGGCCGTCGG CCGGGCCCGT GCCGCCGAGG CGCTGCTGAT CGACGGCACC
GTGAGTGCCG GAGGCGCGAC CGCCGAACTG GTGCGCTTGA TTCAGCGGGC CGGACCGTTC
GGACAGGGGG CGCCCGAGCC GGTGATGGCC TTGCCCCGCC ACCGCATCGT CGATGCCGGG
ATCGTCGGCA ACGGGCATGT CCGCGCCCGC CTCGTCAGCG GTGACGGGCA AGCGGTCGGC
GCGATCGCCT TCCGTGCCGC GCAGGGTCCG TTGGGCGTCG CCCTGCTCGG CGGGATCGGG
CGGAGCTTCC ACGTCGCGGG AACCCTGTCG TGCGACCGCT GGCGCGGGGC GGAGCGGGCC
CAGGTGCGAA TCTGCGACGT GGCGCCCTGT GGATAG
|
|---|
| Protein sequence | MVARVTAAML IDPSSDLPRP FLDVTASALG RPWRERCGDP GLQALAVTMT QAYGLPDLLA
RVLVGRGVRP AEADAYLAPR LRDLMPDPSV LVDMEAAVER LAYAVRAREA VAIFGDYDVD
GASSAALLAG YLRALGVPVR IHIPDRITEG YGPNVGAVTM LREEGAGLLV CVDCGTAGHE
PLAAAAALGL DVIVLDHHGA PEELPQTRAL VNPNRLDDLS GLGHLCAAGV VFMTLVALAR
RLRRDGVFAT STEPRLTDFL DLVALATVAD VVPLTGLNRA FVVQGLAVMR GRGRPGLAAL
LDAAGLSEPP EAWHLGFLVG PRINAGGRIG DAGLGARLLT TTDPMEARRI ADELDRLNRE
RQAIEAQAVA EAEAEMDAHL TRDPDRPVLI AASPEWHPGI VGLIAARLKE RFGRPAFAFA
VKPDGSAVGS GRSVVGADLG GAVRGAVEAG LAVKGGGHAM AAGVTLPPGG LAAFGDSLTH
DLVEAVGRAR AAEALLIDGT VSAGGATAEL VRLIQRAGPF GQGAPEPVMA LPRHRIVDAG
IVGNGHVRAR LVSGDGQAVG AIAFRAAQGP LGVALLGGIG RSFHVAGTLS CDRWRGAERA
QVRICDVAPC G
|
|---|
| |