| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2697 |
|---|
| Symbol | |
|---|
| ID | 5833596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 3014934 |
|---|
| End bp | 3017903 |
|---|
| Gene Length | 2970 bp |
|---|
| Protein Length | 989 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641368497 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_001640159 |
|---|
| Protein GI | 163852116 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.769823 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA CGAACAATCC GGGTGACAAG ACGCAGACCA GAGCCCCCTC GAAGCCGTTG
ACGGTCAAGC GTCCGGTCGA GCAGGGAACG GTCCGTCAGA GCTTCTCCCA CGGGCGGTCG
AAGTCCGTCG TGGTCGAGAC GGTGAAGCGG CGTACGATCG GCGCCGCGCC CGGAGCGGTC
GCGCCCCGTG AGCCCGTCAC CGCGCCTCCG CCGCGTCCTG CCTCCGTGGC GCCCGCGCCG
ACGCCGGCCG CACGTCCGGC CGGCCGAAGC GCCTCTGGCG TCGTGCTGCG CACCCTGAGC
GAGCAGGAGC GGGATGCCCG CGCTGCCGCC CTGGCCGATG CGCAGCGTCG CGAGGCCGAG
GCCCGCGCCC GTGCCGAGGC CGAGATCCAG GCCCGCCGCG ACCGTGAGGA AGCCGAGCGC
CGCGAGCGTG AGGCTGCCGA GGCACGCCGC CGCGAAGAGG ATGAGCGGCG CCGTCAGGAA
GACGAACTCC GCCGCAAGGC CGCCGAGGAT TCGCGTCGCC GCGCCGAGGA AGAGGCTGCC
CGCGTCGCGG CCCTGCCCGC CGCCGAGGCC CCGCCCGCTG CTGCCGCTCC CGCGGCACCA
GAGCCGGTTG CAGCTTCTGC GCCGGCCCCG GCCGCAGCCC CGGTTGCGCG TCCGACCCCC
GCGGCCACCG CACGTCCCGC TGCCGCTCCG TCGGCCGCGC GTCCGAGTGG TGCGGCCCAA
CGTCCGGCCG CGTCCGGCGC CCGCCCCGGT GTCCGTCCGG CACCGTCGGC TGCCCGTCCG
GCTGCGCCGC AGCCGCCGGC CGAGCCGCGC CGTACCATCA CCGCGGATAT CAAGAAGCCG
CGCGACCTGA ACTTCATGGC GCGCCCGGCC CCGGCGCCGG AGCCCGAGAA GGCGCCGACC
CCGACAACCG CCGCCCGCCC TGCGGGTGCG GGCGCCGCTG CGCGTCCCGC CGGTCGTCCC
GGCGCCGCCG CGGCCGAAGA GGAGTCGGAT ACCAAGCGGG TGATTCGTCG CCCCGGTATG
CCGCTCAAGA TCATTACGCC GCCCAAGACG CCGAAGTCGC CGGGCGGTGA CCGTAACCGT
GGCCGCCTCA CCATCGCCAA CGCAACTGCG GGCGAGGAAG AGCGCACTCG TTCCGTGGCC
TCCTTCCGCC GCCGCCAGCA GCGGATGAGC GGGCATCGGC ACGAGGAGCC CAAGGAGAAA
ATCGTCCGCG ACGTGACAAT TCCAGAGACG ATCACCATCC AAGAACTCGC CAACCGCATG
TCCGAACGTG CGGTGGACGT CATCCGTCTG CTGATGAAGC AAGGCCAGAT CCACAAGATC
ACCGACGTGA TCGATTCGGA TACGGCTCAG CTCATCGCTG AGGAGATGGG CCACACGGTT
CGCCGCGTCG CCGAGTCGGA CGTCGAGGAA GGTCTGACCT CGGACGAGCC GGATCTGGAG
GAGGATCTGG ATCCGCGTCC GCCGGTCGTC ACGATCATGG GTCACGTCGA TCACGGCAAG
ACCTCGCTGC TCGACGCGAT CCGTGCGGCC AACGTGGTCG AGGGTGAGGC CGGCGGCATC
ACCCAGCATA TCGGTGCCTA TCAGGTGGCG GCGCCCTCGG GCGATCTCGT GACCTTCATC
GACACCCCTG GCCACGCGGC CTTCACCTCC ATGCGTGCCC GTGGCGCCAA GGTGACGGAC
ATCGTCGTGA TCGTGGTGGC GGCCGATGAC GGCGTGATGC CCCAGACCGT CGAGGCGATT
CAGCACGCCA AGGCGGCGGG CGTCCCGATG ATCATCGCCA TCAACAAGAT CGACAAGCCC
GATGCGAACC CGCAGCGGGT GCGCACCGAG TTGCTGCAGC ACGACATCCA AGTGGAGTCG
ATGGGCGGTG AGACCCTCGA GTTCGAAGTC TCCGCCAAGA CCGGCGAGGG TCTGCCCGAG
CTTCTCGAAG GCCTTCAGCT CCAGGCCGAG ATCCTGAACC TGCGCGCCAA CGAGAAGCGC
GACGGCGAAG GCACCGTGAT CGAAGCGCAG CTCGATCGTG GTCGCGGCCC TGTTGCCACC
GTGCTCGTGC AGCGCGGCAC GCTGTTCACC GGCGACATCG TCGTCGCCGG CGCCGAGTGG
GGCCGCATCC GCGCCCTCAT CGACGATACT GGCAAGCACG TGCCCTATGC CGGCCCCTCG
GTTCCGGTCG AGGTGCTCGG CTTCAACGGT ACGCCGGACG CCGGCGACCG CGTGATCGTG
GTGCCGAACG AGGCCCGCGC CCGCGAGGTC ACCGAGTACC GCGCCCGCAT CAAGCGCGAG
CGCCTGAACG CCCGCACCGG CGGCGCCAAC CGTTCGCTCG TCGACATGAT GCGCGAGGCC
AAGGAAGGCG CGAACCGCAA GGAACTGCCG ATCATCATCA AGGGTGACGT GCAGGGTTCG
GTCGAGGCCA TCAACGGCGC GCTCACGGCG CTCGGCAACG ACGAGGTCGG CGTTCGCATC
CTGCTCTCGG GCGTGGGCGG CATCACCGAG TCGGACATCA CGCTCGCCAA CGCCTCGAAG
GCGGTGGTGA TCGGCTTCAA CGTGCGCGCC CACAAGGAAG CACGCAACGC GGCCGAGCGC
GACGGCACCG AGATCCGCTA CTACAGCATT ATCTACGACC TCGTGGACGA CATCAAAGCC
ACGCTGTCGG GCATGCTGCC GCCGACGCTT CGCGAGGAGC GTCTCGGCGA GGCGCAGATC
CTGCAGATCT TCGACGTGTC GAAGGTCGGC AAGATCGCCG GTTGCCGGGT CATGGAGGGT
GTTGTCCAGC GCGGCGCCCA TGTCCGCCTG CTACGCAACG ACGTGGTGAT CCACGAGGGC
AAGCTGTCCC AGCTCAAGCG CCTCAAGGAC GACGCCAAGG AAGTCACCGC CGGCTACGAG
TGCGGTATGT CCTTCCAGAA CTACCAGGAC ATGCGCGTGG GCGATTTCAT CGAATGCTTC
AACGTCGAGG AAATCAAGCG CACGCTCTGA
|
|---|
| Protein sequence | MSDTNNPGDK TQTRAPSKPL TVKRPVEQGT VRQSFSHGRS KSVVVETVKR RTIGAAPGAV
APREPVTAPP PRPASVAPAP TPAARPAGRS ASGVVLRTLS EQERDARAAA LADAQRREAE
ARARAEAEIQ ARRDREEAER REREAAEARR REEDERRRQE DELRRKAAED SRRRAEEEAA
RVAALPAAEA PPAAAAPAAP EPVAASAPAP AAAPVARPTP AATARPAAAP SAARPSGAAQ
RPAASGARPG VRPAPSAARP AAPQPPAEPR RTITADIKKP RDLNFMARPA PAPEPEKAPT
PTTAARPAGA GAAARPAGRP GAAAAEEESD TKRVIRRPGM PLKIITPPKT PKSPGGDRNR
GRLTIANATA GEEERTRSVA SFRRRQQRMS GHRHEEPKEK IVRDVTIPET ITIQELANRM
SERAVDVIRL LMKQGQIHKI TDVIDSDTAQ LIAEEMGHTV RRVAESDVEE GLTSDEPDLE
EDLDPRPPVV TIMGHVDHGK TSLLDAIRAA NVVEGEAGGI TQHIGAYQVA APSGDLVTFI
DTPGHAAFTS MRARGAKVTD IVVIVVAADD GVMPQTVEAI QHAKAAGVPM IIAINKIDKP
DANPQRVRTE LLQHDIQVES MGGETLEFEV SAKTGEGLPE LLEGLQLQAE ILNLRANEKR
DGEGTVIEAQ LDRGRGPVAT VLVQRGTLFT GDIVVAGAEW GRIRALIDDT GKHVPYAGPS
VPVEVLGFNG TPDAGDRVIV VPNEARAREV TEYRARIKRE RLNARTGGAN RSLVDMMREA
KEGANRKELP IIIKGDVQGS VEAINGALTA LGNDEVGVRI LLSGVGGITE SDITLANASK
AVVIGFNVRA HKEARNAAER DGTEIRYYSI IYDLVDDIKA TLSGMLPPTL REERLGEAQI
LQIFDVSKVG KIAGCRVMEG VVQRGAHVRL LRNDVVIHEG KLSQLKRLKD DAKEVTAGYE
CGMSFQNYQD MRVGDFIECF NVEEIKRTL
|
|---|
| |