| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2624 |
|---|
| Symbol | |
|---|
| ID | 5831911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2938285 |
|---|
| End bp | 2940075 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641368423 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001640087 |
|---|
| Protein GI | 163852044 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.299727 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGGACCC TCCTCGATCT CCTGCGGGTG ATGCGGCGAC ACGACCGACG GCAGCTCCTG
CTGCTGGGGC TCGGTCTCGG GCTCGCCGCC CTGCTCGAAG TGGTCGGCGT CGCCTCGGTG
CTGCCGTTCC TTACGCTGGT CGGCGATCCC GGTGCGGCCG CGCGAATCCC CTATCTCGCG
AACCTCCGCG ATACCTTCGG TCTCGCCGAC GACCGCACCT TCCTGCTCGC AACCGGGTTT
GCCGCGCTCG CCGCGATCCT GCTGACCAGC GGGGTGAATG CCGCCTTCGC CTATGCGCAA
CTCCTGTTCG CCCACATAGT CGGCTACGGT TTCGCCCGGC GCCTGCTCGC TCGCTACGTC
GATCGCGAGC GCCTGTTCTT TGCGCATGCC AACAGCGCGG AACTCGCCAA GAACGTGCTG
AGCGAGACCG ACCGCCTCGT CGTCGGCGTG CTCACCCCAG CCATGGTGAT CGCCTCGCGC
GGCGCCTCGG CACTGGCGGT GGTGATCTTC CTGATCGCCT ATCAGCCCCG GCTCGCACTG
ATCCTCGGCG GCGGCTTCGG CGGGCTCTAC GTCGCGATCT ATGTCGTGAT GCGGGCCCGC
CTCTCGCGGC TCGGCACCCG CGCGGTGGCG GGCAACGAGG GCCGCTACCG TGTGGTGCAG
GAGACCTTCG GCGCGCTGAC CGAACTCAAG CTCTACGGTC GGGCCGAGAC GTTCACGAGC
AGCTTCGATG CGCCGGCGCG CTCCTACGCC CACGCCCTCG CCTCGAGTCT GGTCACCGGG
CAGTTGCCGC GCTTCGTCAT CGAATCACTT GCCTTCGGCG GCGTGATCGC CGTGGTGCTG
TTCGCGCTGA CGCAAGGGAT CGACACCGCC GGCATGCTGC CGCTGCTCGG CCTGTTCGCC
TTCGCCGGCT ACCGCATGCT GCCGGCCTTC CAGAACATCT TCACCTCCGT CTCGCAGTTG
CGCTTCCACC TGCCCGGCGT GCGCCTGATC GTCGATGCGT TGGCGGGGGA GCGGGAGCCC
GCGCTTCGCA CGGCCGAACG CCTGCCCTTC GCGCAGGCGA TCCGTCTGGA AGATGTCGCG
TTCGACTACG AGCCCGGTCG CCCAACCCTG CGCGGCATCG ACCTGACGAT CACCGCTCAC
ACCACCGTCG GCCTCGTCGG CCGCACCGGC TCGGGCAAGT CGACGCTGGT GGGCCTGATC
CTCGGCATTC TCACGCCGAC GCGGGGACGC ATTCTGATCG ACGGCCATCC GCTCGACGGC
GACAGCCTGC CGGCTTGGCA GAACCGGATC GGTTACGTGC CCCAGGACGT GTTCCTGATC
GATGGCAGCA TCGCGCAGAA CATCGCTCTC GGCATCCCGC CGGACAGCCT CGACTGGGTG
GCCGTGGAGC GCGCCGCGCG GCTCGCCGGC GCGCACGATT TCATCGCGGC CCTTTCCGCG
GGCTACGACA CCGGTGTGGG CGAGCGCGGT GCCCGGCTCA GCGGCGGCCA GCGGCAACGC
ATCGGCATCG CCCGCGCGCT GTACCACGAC CCCGATGTCA TCGTGTTCGA TGAGGCGACC
AGTGCGCTCG ACGGCGAGAC CGAGGCCGCG GTGATGGAGG CGCTCGGCGC GCTGGGCGGC
ACACGCACGA TCATCATGAT CGCCCACCGC CTTACCTCGC TGCGCCGGGC CGATACGGTC
CACGTCGTCG AGGACGGACG GATCGTCGCC TCGGGGCCGC CCTCGCAGGT GATCGCGGAT
CCCGCTGTCT CGCCCCCGCC TGCGGACGTC GTCGTGGCCC CGGCCCGGTA G
|
|---|
| Protein sequence | MRTLLDLLRV MRRHDRRQLL LLGLGLGLAA LLEVVGVASV LPFLTLVGDP GAAARIPYLA
NLRDTFGLAD DRTFLLATGF AALAAILLTS GVNAAFAYAQ LLFAHIVGYG FARRLLARYV
DRERLFFAHA NSAELAKNVL SETDRLVVGV LTPAMVIASR GASALAVVIF LIAYQPRLAL
ILGGGFGGLY VAIYVVMRAR LSRLGTRAVA GNEGRYRVVQ ETFGALTELK LYGRAETFTS
SFDAPARSYA HALASSLVTG QLPRFVIESL AFGGVIAVVL FALTQGIDTA GMLPLLGLFA
FAGYRMLPAF QNIFTSVSQL RFHLPGVRLI VDALAGEREP ALRTAERLPF AQAIRLEDVA
FDYEPGRPTL RGIDLTITAH TTVGLVGRTG SGKSTLVGLI LGILTPTRGR ILIDGHPLDG
DSLPAWQNRI GYVPQDVFLI DGSIAQNIAL GIPPDSLDWV AVERAARLAG AHDFIAALSA
GYDTGVGERG ARLSGGQRQR IGIARALYHD PDVIVFDEAT SALDGETEAA VMEALGALGG
TRTIIMIAHR LTSLRRADTV HVVEDGRIVA SGPPSQVIAD PAVSPPPADV VVAPAR
|
|---|
| |