Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2535 |
Symbol | |
ID | 5833219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 2845097 |
End bp | 2846350 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641368336 |
Product | polysaccharide export protein |
Protein accession | YP_001640000 |
Protein GI | 163851957 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGCA GTGACTGCGT GACGATCGGA AAAGGGACGG ACGTGGCTCT GCGCCCCGCC TCGACCCGGA TGGAGTCTCC GATGAAGTGC GCTGCGGCCC TGGCAATCCT TGCCGCCGCC CTCGCCCTGC CGGGATGTTC GGTCCTGCCG GCCGCGGGGC CGACCACCTC GGCGATCGAG AGCGGCGCCG ACGTCGCCAC CGCCGAAGGC CTGTTCGCCC GCTACGAAAT CATCGACATC ACCCCCGCCC TCGTCGAGGC CCTGCGCACC CGCCCCCTCG ACAGCCTCCT CGTCACCTTC GGCGACCATC GCCCCTCGGT CGAGCCGGTG ATCGGCGTCG GCGACTCGGT GGCGGTTCAG GTCTGGGAGG CCGGTGCCGG CGGCCTGTTC TCCGGCCCGC TCGTCTCCGA TCGCTTCTCG GCCGGCTCGA AGTCCGCCAC GATCCCCGAG CAGGTGGTCG GGCCCGACGG CGGCATCACC GTTCCCTATG CCGGCCGGAT CAAGGTCGTC GGACGCCGCA CTCAGGATGT GCAGGCGCTG ATCGAGACCG AACTCGCCGG TAAGGCGATC CAGCCGCAAG TGCTCGTCTC CGTCACCAAG CCGGTCTCGC AATCGGTCAC CGTCTCCGGT GAGGCGGCCA TGGGCAAGCG CGTGCCGCTG TCGGGCCGCG GCGACCGCCT GCTCGACGTC ATCGCCCAGG CCGGCGGCGT GCGCACCCCG GTATCCGAGA CCTTCGTGCG GCTGTCGCGC GGCAACCGCA CCGTCACCGT GCCGATGACC ACGGTAGTTT CGAACCCGCG CGAGAACATC TTCGTGCGTC CCGACGACAC GCTGACCCTG GTGCGCGATC CGCAGACCTT CCTGGCCGTG GGTGCGCTCG GCAACACCAC CGAGGTGCCG TTCACGGCGG ACGGGCTGAC GCTGTCGCAG GCGCTGGCTC GTGCCTCCGG CCTGCGCGAG TTCCAGGCCG ATCCGGCGGG CGTGTTCATC TTCCGCTATG AGCCGGCGGC GGTGGTGCGG CGGCTGCGGC CGAACTCGCC GCTGCTATCC TCGCCGCAGG TGCCGGTGGT GTACCGCGTG AACCTGCGCG ACGCGCAAGG CATGTTCCTG ACCCAGAGCT TCCGCATGCG GAACCGCGAT CTCGTCTATG TGTCGAGTTC GCCGTTCGCG GAGCTCGGCA AGGTGCTGAG CGTGTTCTCG ACCGTGGCCT CGCCCATCGC CGCGGGTGCC TCGATCTACA CCGTCACGCG GTAG
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Protein sequence | MDRSDCVTIG KGTDVALRPA STRMESPMKC AAALAILAAA LALPGCSVLP AAGPTTSAIE SGADVATAEG LFARYEIIDI TPALVEALRT RPLDSLLVTF GDHRPSVEPV IGVGDSVAVQ VWEAGAGGLF SGPLVSDRFS AGSKSATIPE QVVGPDGGIT VPYAGRIKVV GRRTQDVQAL IETELAGKAI QPQVLVSVTK PVSQSVTVSG EAAMGKRVPL SGRGDRLLDV IAQAGGVRTP VSETFVRLSR GNRTVTVPMT TVVSNPRENI FVRPDDTLTL VRDPQTFLAV GALGNTTEVP FTADGLTLSQ ALARASGLRE FQADPAGVFI FRYEPAAVVR RLRPNSPLLS SPQVPVVYRV NLRDAQGMFL TQSFRMRNRD LVYVSSSPFA ELGKVLSVFS TVASPIAAGA SIYTVTR
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