| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2037 |
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| Symbol | |
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| ID | 5834748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 2273126 |
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| End bp | 2275153 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641367835 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001639504 |
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| Protein GI | 163851461 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTGCCGAA AACCGGTCTC CATCGTTCGG GCCGATGCTC TGACACGAAG CACCATGCAG
AAGCGCACCC TCAAGACGGC GGTGATGGTC GTCCACGATC TCGCCGCGAC CGCGGCGGCC
GTGGTGCTGA CCTTCGTCTT CCGCTTTCAG GACGGGGCGC TCGTCGAGCG CCTGCACGCG
CTGCCGCTGC TGCTGCCGCC GTTCCTCGCC TATGCCGGGC TGATCTACGC GTGGTTCCGG
CTCTACCGCA CCAAGTGGCG CTTCGCCTCG CTGCCCGACC TCGCCGGCAT CGTGCGCGCC
GCGAGCGTCA CCGCGCTGAC GCTGCTCGTG CTCGACTACG TGCTGGTCTC CTCGAATCTC
TACGGGTTCT ACTTCTTCGG CAAGGTCGCC ATCGTCCTCT ACTGGGTCTT GCAGATCTTC
CTGCTCGGCG GGCCGCGGCT GGCGTTCCGC TACCTGAAAT ACGCCCGCTC CCGGCAGAGT
CAGGCCCGCA CCGCCACCAC GCCGACGCTG CTGCTGGGCC GCGGCGCCGA TATCGAGATC
GTGCTGCGGG CGATCGAATC CGGCTCGGTC AAGCGTCTCT CCCCCAAGGG CATCCTCTCG
CCGCGGGCGG ACGAGGCGGG CCAGATGATG CGCGGCGTGC CCGTACTCGG CGGGTTTCGC
GACCTCGAAC AGGTGGTTGC GGACCTCGCC AACCGTGGCC TGCCGGTGCG CCGGCTCGTG
GCGACGCCGA GCGCGCTGGC GCCCGAATCC GAGCCCGACG ATCTCATCGC CCGCGCGCGC
CGTCTCGGCT TGCCGCTCGC CCGCGTCACC AGCCTCGGCG AGGGGATGCG CGACGCCGAA
CTCGCACCGC TGGAGATCGA GGATCTGCTC CTGCGCCCCA CCGTCGCCAT CGACCGGCCG
CGGCTCGAGC GCTTCCTCAC CGGTGCCCGC GTCGTCGTCA CGGGCGGCGG CGGCTCGATC
GGCGCCGAGA TCTGCGCCCG GGCGGTCGCC TTCGGCGCCT CGGCGCTGCT CGTCATCGAG
AACTCGGAGC CGGCGCTGCA TGCCGTCCTC AACGGACCGG CCCTGCTCCA CGCCGAGGCC
GCGGTCGAGG GGGCGCTCGC CGACATCCGC GACCGCGAGC GGCTGCACGC GATCCTCCGC
GATTTCCGGC CCACTTACGT CTTCCACGCC GCCGCGCTGA AGCAGGTGCC CTATCTCGAG
CGCGACTGGG CCGAGGGCAT CAAGACCAAC GTGTTCGGTT CGATCAACGT CGCCGAGGCG
ACGGTGGCCG CGGGCGCCCG TGCCCTGGTG ATGATCTCCA CCGACAAGGC GATCGAGCCG
GTCTCGCAGC TCGGCGTGAC CAAGCGCTTC GCCGAGATGG TGGCCCAATC CCTCGACGCG
GAGCGCTCGG GCCCCGAGGC GACCCGGCTC ATCGCCGTGC GCTTCGGCAA CGTGCTGGGC
TCGGCCGGCT CGGTGGTGCC GGTGTTCAAG GCGCAGATCG CCCGCGGCGG GCCGGTCACG
GTGACCCATG CCGAGATGGT GCGCTACTTC ATGACCGTGC GCGAGGCCTC GGACCTCGTG
CTCACCGCCG CATCCCACGC CGACGCGGAA GGGCGCGGCG ACACCGGCGA CCAGCGCGCG
GCGGTCTACG TGCTGAAGAT GGGCCAGCCC GTGCGCATCC GGGATCTGGC CGAGCGGATG
ATCCGCCTCG CCGGCTTCGA GCCCGGCGAG GACATCGAGA TTCAGGTCAC CGGCGCACGG
CCGGGCGAGC GGCTCAACGA GATCCTGTTT GCCAAGGAAG AGCCGCGTGT GACGCTCGCC
GGCATCGAAG GCGTCATGGC GGCCAAGCCC GTCTTCGCCG ACCGCGCGGT GCTGGAAGGA
TGGATTCTTC GTCTGTGCGA GGCCGTCACG GCGGGCGACC GGGCGGCGGC GGAAGCCGTG
TTCGAGGAGG CGATCCCGGA TTTCCGCAAT CGCGCCGGGG CCGTTCCGAA CACCAAGCCC
GAGACCATCG CGCCGCCGGC GGCAGCCACC GAGGCGGCGA CCGCCTGA
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| Protein sequence | MCRKPVSIVR ADALTRSTMQ KRTLKTAVMV VHDLAATAAA VVLTFVFRFQ DGALVERLHA
LPLLLPPFLA YAGLIYAWFR LYRTKWRFAS LPDLAGIVRA ASVTALTLLV LDYVLVSSNL
YGFYFFGKVA IVLYWVLQIF LLGGPRLAFR YLKYARSRQS QARTATTPTL LLGRGADIEI
VLRAIESGSV KRLSPKGILS PRADEAGQMM RGVPVLGGFR DLEQVVADLA NRGLPVRRLV
ATPSALAPES EPDDLIARAR RLGLPLARVT SLGEGMRDAE LAPLEIEDLL LRPTVAIDRP
RLERFLTGAR VVVTGGGGSI GAEICARAVA FGASALLVIE NSEPALHAVL NGPALLHAEA
AVEGALADIR DRERLHAILR DFRPTYVFHA AALKQVPYLE RDWAEGIKTN VFGSINVAEA
TVAAGARALV MISTDKAIEP VSQLGVTKRF AEMVAQSLDA ERSGPEATRL IAVRFGNVLG
SAGSVVPVFK AQIARGGPVT VTHAEMVRYF MTVREASDLV LTAASHADAE GRGDTGDQRA
AVYVLKMGQP VRIRDLAERM IRLAGFEPGE DIEIQVTGAR PGERLNEILF AKEEPRVTLA
GIEGVMAAKP VFADRAVLEG WILRLCEAVT AGDRAAAEAV FEEAIPDFRN RAGAVPNTKP
ETIAPPAAAT EAATA
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