| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1967 |
|---|
| Symbol | |
|---|
| ID | 5831073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2199125 |
|---|
| End bp | 2200447 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641367768 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_001639437 |
|---|
| Protein GI | 163851394 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.170125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGA CCCTTCGCCT CGGCATTGCG GGGCTCGGCA CGGTCGGTGC CTCCGTCCTG
CACATGGTCG CCCGCCGCGC CGAGGCGCTC ACCGCCGCGA CCGGCCGCAC GATCACCGTC
ACCGCCGTCT CCGCCCGTGA CCGGAGCCGC GATCGCGGCG TTGACCTGTC GGGCCTGCAC
TGGTTCGACG ATCCGGTGGC GCTCGCGCGC TCGCCCGAGA TCGACGTGTT CGTCGAACTC
GTCGGCGGCT CGGAAGGGCC GGCCAAGGCG GCGGTCGAGG CGGCGCTCGG TGCCGGCAAA
CATGTCGTAA CCGCCAACAA GGCGCTGCTC GCCCATCACG GTGCGGCGCT CGCCCGTTTG
GCCGAAGCGA ACGGCGTCGC GCTCGCCTAC GAGGCGTCGG TGGCAGGCGG CATCCCGGTC
ATCAAGGCGA TCCGCGAGGG GCTTTCCGGC AACGCGATCT CACGCGTCTA CGGAATCCTC
AACGGCACCT GCAACTACAT CCTCAGCCGC ATGGAGGCGG AGGGGCTGAC CTTCGAGGCC
TGCCTCAAGG ACGCGCAGGC GCTCGGCTAC GCCGAGGCCG ACCCGACTTT CGACATCGAG
GGCTTCGACA CCGCCCACAA GCTCGCGATC CTCACCAGCC TCGCCTTCGG CGTGGAGATC
GACGCCGAGG GCGTCTCGGT CGAGGGCATC TCGGCGATCC AGCCCCTCGA CCTCACCATG
GCCGACGAAC TCGGCTACCG CATCAAGTTG CTCGGCGTCG CGCAGGCGAC GGAGGCGGGG
ATCGAGCAGC GGGTCCACCC GACCATGGTG GCCAAAGCTT CGGCCATCGC CCAGGTCATG
GGCGTGACCA ACGCCGTCAC CGTCGATGCG GATGCGGTCG GCGAGCTGAC CCTGATCGGC
CCCGGCGCCG GCGGGGCGGC CACGGCCTCC GCGGTCGTCG CCGACATCAC CGATGTGGCG
CTCGGGCTCG TGCGCCCCAC CTTCGGCCAG CCGATCGCGG GCCTTGCGCC GCCGCGCCGG
GTCGAGATGC AGCGCCACGA GGGCGGCTAC TACATCCGGC TGACCGTGCA CGATCGCACC
GGCGTCGCGG CCGGCGTCGC CACCCGGATG GCGGAGGCCA ATATCTCGAT CGAGAGCATC
GTCCAGCGCC GCTCGGCCAA GGCCGCCTCC AGCGATCCGC AGGGCCTCTC CGGCCAGCCG
GTGCCGCTGG TGCTGATCAC CTACGCCGCG ACCGAGGGCA ATGTCCGCGA GGCGCTGGCC
GCCATCGACC GCGATGGCCT GCTCGCCGAG GCACCGCAAT TGATCCGGAT CGAACGCGAA
TAG
|
|---|
| Protein sequence | MTQTLRLGIA GLGTVGASVL HMVARRAEAL TAATGRTITV TAVSARDRSR DRGVDLSGLH
WFDDPVALAR SPEIDVFVEL VGGSEGPAKA AVEAALGAGK HVVTANKALL AHHGAALARL
AEANGVALAY EASVAGGIPV IKAIREGLSG NAISRVYGIL NGTCNYILSR MEAEGLTFEA
CLKDAQALGY AEADPTFDIE GFDTAHKLAI LTSLAFGVEI DAEGVSVEGI SAIQPLDLTM
ADELGYRIKL LGVAQATEAG IEQRVHPTMV AKASAIAQVM GVTNAVTVDA DAVGELTLIG
PGAGGAATAS AVVADITDVA LGLVRPTFGQ PIAGLAPPRR VEMQRHEGGY YIRLTVHDRT
GVAAGVATRM AEANISIESI VQRRSAKAAS SDPQGLSGQP VPLVLITYAA TEGNVREALA
AIDRDGLLAE APQLIRIERE
|
|---|
| |