26 homologs were found in PanDaTox collection
for query gene Mext_1829 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_1829  methylene-tetrahydromethanopterin dehydrogenase  100 
 
 
297 aa  594  1e-169  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2164  Methylene-tetrahydromethanopterin dehydrogenase  100 
 
 
297 aa  594  1e-169  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0602967  normal  0.200287 
 
 
-
 
NC_010725  Mpop_1780  Methylene-tetrahydromethanopterin dehydrogenase  97.31 
 
 
297 aa  548  1e-155  Methylobacterium populi BJ001  Bacteria  normal  0.0681451  normal 
 
 
-
 
NC_010505  Mrad2831_0528  methylene-tetrahydromethanopterin dehydrogenase  86.53 
 
 
297 aa  486  1e-136  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.82128 
 
 
-
 
NC_010511  M446_5778  methylene-tetrahydromethanopterin dehydrogenase  80.81 
 
 
297 aa  447  1e-125  Methylobacterium sp. 4-46  Bacteria  normal  0.618077  normal 
 
 
-
 
NC_011894  Mnod_6002  Methylene-tetrahydromethanopterin dehydrogenase  80.81 
 
 
297 aa  427  1e-119  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2385  Methylenetetrahydrofolate dehydrogenase (NADP(+))  52.53 
 
 
295 aa  316  4e-85  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010625  Bphy_6482  methylene-tetrahydromethanopterin dehydrogenase  48.8 
 
 
308 aa  275  9e-73  Burkholderia phymatum STM815  Bacteria  normal  normal  0.428861 
 
 
-
 
NC_008825  Mpe_A2607  methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative  49.83 
 
 
300 aa  264  1e-69  Methylibium petroleiphilum PM1  Bacteria  normal  0.0254365  normal 
 
 
-
 
NC_012791  Vapar_3084  Methylenetetrahydrofolate dehydrogenase (NADP(+))  49.16 
 
 
305 aa  256  3e-67  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2431  methylene-tetrahydromethanopterin dehydrogenase(NAD+/NADP+) (mtdB)  47.97 
 
 
313 aa  256  5e-67  Burkholderia xenovorans LB400  Bacteria  normal  0.145051  normal 
 
 
-
 
NC_010524  Lcho_3152  methylenetetrahydrofolate dehydrogenase (NADP(+))  47.57 
 
 
303 aa  246  3e-64  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007947  Mfla_1660  methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative  45.86 
 
 
299 aa  241  1e-62  Methylobacillus flagellatus KT  Bacteria  normal  0.028251  normal  0.670151 
 
 
-
 
NC_009720  Xaut_1787  methylene-tetrahydromethanopterin dehydrogenase  49.49 
 
 
297 aa  241  1e-62  Xanthobacter autotrophicus Py2  Bacteria  normal  0.322535  normal  0.634853 
 
 
-
 
NC_010625  Bphy_5948  methylenetetrahydrofolate dehydrogenase (NADP(+))  44.84 
 
 
291 aa  237  2e-61  Burkholderia phymatum STM815  Bacteria  normal  0.620431  hitchhiker  0.00520062 
 
 
-
 
NC_002977  MCA3018  methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative  45.3 
 
 
301 aa  231  9e-60  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA3019  methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative  43.3 
 
 
293 aa  218  1e-55  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2133  Methylenetetrahydrofolate dehydrogenase (NADP(+))  30.07 
 
 
288 aa  114  2.0000000000000002e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.297933 
 
 
-
 
NC_010172  Mext_1797  methylenetetrahydrofolate dehydrogenase (NADP(+))  29.73 
 
 
288 aa  114  3e-24  Methylobacterium extorquens PA1  Bacteria  normal  0.840906  normal  0.369167 
 
 
-
 
NC_010725  Mpop_1749  Methylenetetrahydrofolate dehydrogenase (NADP(+))  30.07 
 
 
288 aa  112  5e-24  Methylobacterium populi BJ001  Bacteria  normal  0.32958  normal  0.767323 
 
 
-
 
NC_010511  M446_6554  methylenetetrahydrofolate dehydrogenase (NADP(+))  31.08 
 
 
287 aa  107  2e-22  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0995051 
 
 
-
 
NC_002977  MCA0508  methylenetetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase  31.08 
 
 
286 aa  106  4e-22  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3259  methylenetetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase  32.2 
 
 
286 aa  106  5e-22  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7114  Methylene-tetrahydromethanopterin dehydrogenase  32.98 
 
 
286 aa  105  9e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0631744  n/a   
 
 
-
 
NC_010505  Mrad2831_3668  methylenetetrahydrofolate dehydrogenase (NADP(+))  28.38 
 
 
287 aa  103  5e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.222101  normal  0.39273 
 
 
-
 
NC_014148  Plim_3754  Methylenetetrahydrofolate dehydrogenase (NADP(+))  31.99 
 
 
288 aa  93.6  4e-18  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
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