| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1680 |
|---|
| Symbol | |
|---|
| ID | 5831288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1894562 |
|---|
| End bp | 1895500 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641367479 |
|---|
| Product | LysR substrate-binding |
|---|
| Protein accession | YP_001639150 |
|---|
| Protein GI | 163851107 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.915427 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGC GAAGGTCGCT TCCCCCGCTC GCGACGCTGA GGGCCTTCGA GGCGGCAGGG
CGCCGCCTGA GCTTCCGCGG AGCAGCCGAC GAACTGGGCG TCACGCCGAC CGCCATCAGC
CATCAGATCC GGCTTCTCGA ACAAACCCTG GGGCTGCGCC TCTTCCACCG CGAGACGCGC
CGGGTCCGAC TGACCGCAGA GGGAGCCGTG CTGCTGCCCG TGCTCCGCGA CGGCTTCGAC
GCGTTTGCCG AAGCCATCGA CCAGATCCGC GGCCGGCGCG CGGCCGGTGT CCTCACGCTC
TCGGCTCCGA CCGCCTTCGT CGCGAAGTGG CTGGTGCCAC GGCTTGCCGA CTTCCGTGCC
GCGCATCCCG CTTGCGACCT GCGACTGCAC GCGTCCGACA GCCTGATCGA TTTCGCTCGC
GATGGCGTGG ATGTCGCGGT CCGGTACGGG CCGGGTCCCT ATTCCGATTT CGACGCTCAC
AGGCTTCTAG CCGAGCGCGT TACTCCTGCT TGTAGTCCCC ACCTCGCCAT TCGATCCGTG
GGTGACTTGA GACATCACAC GCTGCTGCAT TTCGAGTGGC CCCGCCTGAC CGACGAGACG
CCGACTTGGC CTGCCTGGTT GCGGCATGCC GGGGTGACCG GCGTCGATGG CAGAGCGGGC
ATTCGGTTCA GCGACGAGGG GCATGTCATC CAGGCCGCGA TCGCCGGCCA GGGGATAGCG
CTCCTCTCTG ACGTGCTGAC CGCCGCCGAG TTGACGAGCG GTGCCCTTGT CCAACCGTTC
GGGCCTGTCC TCGACGCGTA CCCTTACTGG GTCGTTCGCC CGCGCCACTC GGTTCGGAAA
GCAGATGTCG AGAAGTTGGT CAGCTGGCTT GTCTCCGCCG CTGCAGGCCC CGTGGCGATC
GGTGCCAAGC CGAATGTCGC CTTTCGGGCG ACAACCTGA
|
|---|
| Protein sequence | MTMRRSLPPL ATLRAFEAAG RRLSFRGAAD ELGVTPTAIS HQIRLLEQTL GLRLFHRETR
RVRLTAEGAV LLPVLRDGFD AFAEAIDQIR GRRAAGVLTL SAPTAFVAKW LVPRLADFRA
AHPACDLRLH ASDSLIDFAR DGVDVAVRYG PGPYSDFDAH RLLAERVTPA CSPHLAIRSV
GDLRHHTLLH FEWPRLTDET PTWPAWLRHA GVTGVDGRAG IRFSDEGHVI QAAIAGQGIA
LLSDVLTAAE LTSGALVQPF GPVLDAYPYW VVRPRHSVRK ADVEKLVSWL VSAAAGPVAI
GAKPNVAFRA TT
|
|---|
| |