| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1634 |
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| Symbol | truA |
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| ID | 5835116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1822223 |
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| End bp | 1822975 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641367432 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001639104 |
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| Protein GI | 163851061 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.228905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.120897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCGCT ACAAGCTCGT CATCGAGTAC GACGGCGCGC CGTTCCGCGG CTGGCAGCGT
CAGGCCGACG ACCCGACCGT GCAAGCCGCC ATCGAGACCG CCGTGACGCG CTTCTCCGGC
GAGACGGCGC GGCTCACCTG TGCCGGTCGC ACCGATGCCG GCGTGCACGC AATCCATCAG
GTCGCCCATC TCGACCTTGC GAAGGATTGG CGCACCGACA CCGTGCGCGA CGCGCTGAAC
GCGCGTCTGC GGCCGCAGCC CGTCGCCATC CTCTCCGCCG AGGTGGTGCC ACAGGAGTTC
GACGCGCGAC ACTCGGCGAT CCGGCGGCAC TACCGCTACC GCATCCTCAA CCGGCGCAGC
CCCGCCGCGC TCACCCGCGC CCATGTCTGG CAGGTGCCCT GGCCGCTCGA TGCCGAGCTG
ATGCACAGGG CGGCGCAACG GCTCCTCGGG CACCACGATT TCTCGGCGTT CCGCGCCGCC
GAGTGCCAGG CAAAGTCGCC GATGCGGACA CTGGAACAGC TCGACGTGAC ACGCGTGCGG
ATGGGGCTAT TCGAGGAGAT CGTGATCGCG ACCTCGGCGC GCTCGTTCCT GCACCATCAG
GTGCGCGCCA TGGCCGGCAC GCTGATGCTC GCCGGCTGCA AACGCCTCTC CGCCGACGAC
GTGGCGGAAA TCCTGGCGAC GGGAGCCAAG CACCGCTGCG GGCCGCTGGC GCCGGCCTGC
GGGCTGACCT TCGTTGGGGT CGATTATCCC TAG
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| Protein sequence | MPRYKLVIEY DGAPFRGWQR QADDPTVQAA IETAVTRFSG ETARLTCAGR TDAGVHAIHQ
VAHLDLAKDW RTDTVRDALN ARLRPQPVAI LSAEVVPQEF DARHSAIRRH YRYRILNRRS
PAALTRAHVW QVPWPLDAEL MHRAAQRLLG HHDFSAFRAA ECQAKSPMRT LEQLDVTRVR
MGLFEEIVIA TSARSFLHHQ VRAMAGTLML AGCKRLSADD VAEILATGAK HRCGPLAPAC
GLTFVGVDYP
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