Gene Mext_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1434 
Symbol 
ID5833625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1604973 
End bp1606349 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content72% 
IMG OID641367234 
Producthypothetical protein 
Protein accessionYP_001638906 
Protein GI163850863 
COG category[S] Function unknown 
COG ID[COG5323] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01630] phage uncharacterized protein (putative large terminase), C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.834365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCAGC CAGCCGACCA ACCCTGCACG CCGCCGACCT CGTGGCGATG CGCTCGGATA 
TCGCGCGCCG CTATGCTGCA TTCGCGGCGG CGGAGCCGGA CGACGGCGTT CTTGACCCGT
CTCTCGCCGG ACCATCTGCG CCTGCTTGAG GCTGACTGGC TTCACCTCGC GCGGCACGAC
CAGCTTCCGC CCCCGGGAAA CTGGACGACC TGGGCCGTGA TCGGGGGACG CGGCTCCGGA
AAAACCCGGA CCGGCGCCGA ATGGGTGCGC GGCCTCGCCC ATGGCGACCC GGTGTTCACG
CCGGAGCCGG TGGAGCGGAT CGCCCTCGTC GGCGAGACCT TCGCCGATGT GCGCGACGTG
ATGATCGAGG GGCCGTCCGG GCTTCTCGCC CTGCCGCGTC TCGGCGGTGC GCCGCCGGTC
TGGCAACCGT CGCGGCGGCG GGTGGTGTTC GGCAACGGCG CGGTGGCGCT CGCCTTCTCC
GCCGAGGAGC CGGATTCCCT GCGCGGCCCG CAATTCGGTG CCGTGTGGTC CGACGAGGTC
GCCAAGTGGC GCGAGGCCGA GGCCACCTAC GACATGATCC AGTTCGGTCT GCGGCTCGGA
ACGCATCCGC GCGGTCTCGT CACCACGACG CCGCGTCCGG TGCCGCTGAT CCGACGGCTG
CTTGCCGACC CGCGCACGGT GGTGACGCGC TCGCGCACCG CCGACAATGC TCAGAACCTC
GCGCCGAGCT TTTTGGAGGA GGTGGTCGGC CGCTACGCCG GCACCCGGCT CAGGCGGCAG
GAACTCGATG GCGAGTTGAT CGAGGACCGG CCGGATGCGC TCTGGACCCG TGATGCCATC
GAGCGGGCGC GCGTCTCCGA GGCGCCGCCG CTGCAACGCA TCGCCGTCGC CATCGATCCG
CCGGCCTCCT CCCGTGTCGG AGCCGATGCC TGCGGCATCG TCGCGGCCGG GCTCGCGGCC
GACGGAACCG CATACGTGCT GGCCGATGCA ACTTTGGAAC AGGCTGCACC CGCCGTCTGG
GCGCGAGCCG CACTGGCCCT GTACCACCGC CTGGCGGCCG ACGCGCTGGT AGCCGAGGTC
AACCAGGGTG GCGAGATGGT CGTCGCGGTG TTGGCGGAAG CCGACCCGAG CGTGCCTGTT
GCGACGGTGC GAGCGACGCG GGGCAAGCTG CTGCGGGCCG AGCCGGTCTC GCTGCTCTAC
GCCCAGGGGC GCATCCGCCA TGTCGGGCCA TTACCGGCGC TGGAGGACGA GATGTGCGCC
TTCGGTCCCG GCGGTCTGCC CGGTGGCGGT TCGCCGGATC GGCTCGATGC GCTGGTCTGG
GCGCTCACGC ACCTGATGCT CGCGCCGTCC GTCGAGCCGC GTATCCGCTG GCTCTGA
 
Protein sequence
MVQPADQPCT PPTSWRCARI SRAAMLHSRR RSRTTAFLTR LSPDHLRLLE ADWLHLARHD 
QLPPPGNWTT WAVIGGRGSG KTRTGAEWVR GLAHGDPVFT PEPVERIALV GETFADVRDV
MIEGPSGLLA LPRLGGAPPV WQPSRRRVVF GNGAVALAFS AEEPDSLRGP QFGAVWSDEV
AKWREAEATY DMIQFGLRLG THPRGLVTTT PRPVPLIRRL LADPRTVVTR SRTADNAQNL
APSFLEEVVG RYAGTRLRRQ ELDGELIEDR PDALWTRDAI ERARVSEAPP LQRIAVAIDP
PASSRVGADA CGIVAAGLAA DGTAYVLADA TLEQAAPAVW ARAALALYHR LAADALVAEV
NQGGEMVVAV LAEADPSVPV ATVRATRGKL LRAEPVSLLY AQGRIRHVGP LPALEDEMCA
FGPGGLPGGG SPDRLDALVW ALTHLMLAPS VEPRIRWL