| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1386 |
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| Symbol | |
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| ID | 5831239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1556356 |
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| End bp | 1557378 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641367186 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001638858 |
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| Protein GI | 163850815 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00204846 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCTGA ACCGCCGCCA CCTTCTCGCG GCCGGGCTCG CTGCGCCCGC GCTGCTGAAG
CTCGGAACCG GCCCGGCCCG GGCCGCCACG ACCCTGAAGC TCTCGCACCA GTTCCCCGGC
GGCTCGATCG ACGAGGGCGA CTTTCGCGAT CGGATGTGCC GGAAGTTCGC GGCCGCCATC
AAGGAGCGCT CGAAGGGCGC GATGGAGGTG CAGGTCTATC CCGGCTCCTC GTTGATGAAG
ACCAACGCCC AGTTCAGCGC CATGCGCAAA GGGGCGCTCG ATCTCTCGCT CTACCCCTCG
CCCTACGCGG GCGGCGAGGT GCCGGAGATG AATATCGGCC TGATGCCGGC CCTGGTCTCT
TCCTATGCCC AGGCGCTCGC CTGGAAGGAC GCGCCCGTCG GCCGCAAGCT CACAGAGATC
CTGGATTCCA AGGGCATCGT GCTGGTGTCC TGGGTCTGGC AGGCCGGCGG CATCGCGAGC
CGCGAGCGCC CGCTGCTGAC GCCCGACGAC GCCAAGGGCA TGAAGGTCCG CGGCGGCTCG
CGCGAGATGG ACCTGATGAT GAAGCAGGCC GGCGCGGCCA CGCTCTCGCT GCCGTCGAAC
GAATCCTACG CCGCGATGCA GACCGGCGCC TGCGACGCAG TGCTGACCTC CTCCACCAGC
CTGATCTCGT TCCGCCTGGA GGAGATCTCG AAGGCCCTGA CCTCCGGCCG CGAGCGCTCC
TACTGGTTCA TGCTCGAGCC GATCATGATG TCGAAGATCG TGTTCTCCGG TCTGCCCAAG
GACCAGCAGG ATCTCATCAT GGCGGTCGGC GCCGAACTCG AGAGCTTCGG CCAGGAGGGC
GCCAAGGCCG ACGACACCCG CGTCGAGGAA GTGTTCGGCA AGGCCGGCGC CAAGGTGGTG
CAGCTCGACG AGGTCAATCT CGGCAAGTGG CGCGACATCG CCCGCGACAC CGCCTGGAAG
GACTTCGCCA ACAAGAACGC GAGCTGCGCC GAGCTGCTCA AGCTGGCGGA GAAGGTCGGA
TGA
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| Protein sequence | MTLNRRHLLA AGLAAPALLK LGTGPARAAT TLKLSHQFPG GSIDEGDFRD RMCRKFAAAI
KERSKGAMEV QVYPGSSLMK TNAQFSAMRK GALDLSLYPS PYAGGEVPEM NIGLMPALVS
SYAQALAWKD APVGRKLTEI LDSKGIVLVS WVWQAGGIAS RERPLLTPDD AKGMKVRGGS
REMDLMMKQA GAATLSLPSN ESYAAMQTGA CDAVLTSSTS LISFRLEEIS KALTSGRERS
YWFMLEPIMM SKIVFSGLPK DQQDLIMAVG AELESFGQEG AKADDTRVEE VFGKAGAKVV
QLDEVNLGKW RDIARDTAWK DFANKNASCA ELLKLAEKVG
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