Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1277 |
Symbol | |
ID | 5831829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 1416957 |
End bp | 1418753 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641367069 |
Product | extracellular solute-binding protein |
Protein accession | YP_001638749 |
Protein GI | 163850706 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGTCCG CCCACCGGCG GCCTTGTTCT TCGCCTCGCC CCCCGGATGC CGGACGCGAT GGCCCCGACA CAGGCTACCG TTTCCCGTTC TGCGGGCATG TGGCCGGCAG CTTGCATTCG GTCGAGCGTA TCCCTGGCAC AAGTGCCCGG GCCACGGAGC GTGTGCGACC TGTGATGGTG TTCAATCTGA AGAGAAACGG CGCCGGTGCG GCGCTCGCCG GCCTGCTGCT GCTTGGGCTC AGTCCGGCCG CCCTGGCGCA GGGCGTTCTG CGCATCGGCA TGACAGCGTC CGACATTCCC CTGACCACCG GCCAGGCCGA CAACGGCGGC GAGGGCATGC GGTTCATGGG CTACACAGTC TATGACGGGC TCATCAATTG GGACCTGACG AGCGCGGAAC TCGCCTCCGA CCTCACGCCC GGCCTCGCCA CGAGTTGGAC GGTGGACCTG AACGACCAGA CCAAGTGGAC CTTCAAGCTG CGCCCGGGCG TCACGTTCCA CGACGGCTCG GACTTCACCG CCGATGCGGT GGTGTGGAAC CTCGACAAGC TCCTGAAGAG CGATGCGCCC CAGTACGACC CGCGCCAGTC CGCCCAGGGC AAGACCCGTA TCCCGGCGGT GGCGAGCTAC CGCGCGGTCG ATCCGCTGAC CGTCGAGATC ACCACCAAGA TCCCCGACGC GACGCTGCCC TACCAGATCG CCTGGATCAT GATGTCCTCC CCCGCCCAGT GGGAGAAACT CGGCAAGTCC TGGGACGCCT TCGCCAAGCA GCCCTCGGGC ACCGGCCCGT GGAAGCTGAC GCTGTTCGCC CCCCGCGAGC GGGCCGAGAT GGCCCCGAAC CCGGCCTACT GGGACAAGAA GCGGATCCCG AAGCTCGACA AGCTGGTGCT GGTGCCGCTG CCGGAGGCCA ACGCCCGGGT CGCGGCCCTG CGCGCCGGGC AGGTCGATTG GATCGAGGCC CCGGCGCCGG ACGCCATCGC CTCGTTGAAG GGCGCGGGCT TCACCATCGT CACCAACGCC TACCCGCACA ACTGGACGTG GCATCTCTCC CGGGGCGAGG GCTCGCCGTG GAACGACGTC CGCGTGCGCA AGGCGGTCAA CCTCGCCATC GACCGCGAGG GCCTGAAAGA GCTGCTGGGC GGGGTGGCGA TCCCGGCCAA GGGCTTCTAC CCGCCGAACC ACCAGTGGTT CGGCCGCACC ACCTTCGACG TGAAGTACGA TCCCGAGGCG GCCAAGAAGC TGCTTGCCGA GGCCGGCTAC GGCAAGGCGA AGCCGTTGAA GTTCAAGGTG GCAATCTCGG CCTCGGGCTC GGGCCAGATG CAGCCGCTGC CGATGAACGA GTTCGTACAG CAGAACCTCG CCGATGTCGG CGTCCAGGTC GACTACGAGG TCGTCGAGTG GAACACGCTG ATCAACGTCT GGCGCGCGGG CGCCAAGGCC GACATCTCCC GCGGCGTATC GGCGATCAAT TACTCCTACT TCATCCAAGA CCCGTTCACC GGCTTCATCC GCCACCTGCA GTGCAACCTC GCGCCGCCGA ACGGCACCAA CTGGGGCTAT TACTGCGATC CTGAGATGGA CCAGCTGTTC GATCAAGTGC GCACCACCTT CGACAAGGAG ACGCAGAACA AGGTCCTCCA GAAGGTTCAC GAGAAGTTCG TCGACGACGC GCTGTTCGTG ATGATCACCC ACGACGTCAA TCCGCGGGCG ATGAGCCCGA AGGTGAAGGG CTTCGTCCAG GCGCGCAACT GGTTCCAGGA CTTCTCAACG ATCACCATCG CCACCGCCGG GCGGTGA
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Protein sequence | MASAHRRPCS SPRPPDAGRD GPDTGYRFPF CGHVAGSLHS VERIPGTSAR ATERVRPVMV FNLKRNGAGA ALAGLLLLGL SPAALAQGVL RIGMTASDIP LTTGQADNGG EGMRFMGYTV YDGLINWDLT SAELASDLTP GLATSWTVDL NDQTKWTFKL RPGVTFHDGS DFTADAVVWN LDKLLKSDAP QYDPRQSAQG KTRIPAVASY RAVDPLTVEI TTKIPDATLP YQIAWIMMSS PAQWEKLGKS WDAFAKQPSG TGPWKLTLFA PRERAEMAPN PAYWDKKRIP KLDKLVLVPL PEANARVAAL RAGQVDWIEA PAPDAIASLK GAGFTIVTNA YPHNWTWHLS RGEGSPWNDV RVRKAVNLAI DREGLKELLG GVAIPAKGFY PPNHQWFGRT TFDVKYDPEA AKKLLAEAGY GKAKPLKFKV AISASGSGQM QPLPMNEFVQ QNLADVGVQV DYEVVEWNTL INVWRAGAKA DISRGVSAIN YSYFIQDPFT GFIRHLQCNL APPNGTNWGY YCDPEMDQLF DQVRTTFDKE TQNKVLQKVH EKFVDDALFV MITHDVNPRA MSPKVKGFVQ ARNWFQDFST ITIATAGR
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