Gene Mext_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1261 
Symbol 
ID5831250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1397418 
End bp1398239 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID641367054 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001638734 
Protein GI163850691 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.306936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCT TACGTCTCAA ACCCCTGGCC GAGGGGATGG CGGTTCCCGT CGCCATCCTC 
GTGATCTGGC AGCTCGCCTG CACGGCCGGG CTCGTCAACC CGATGGTGCT GCCCTCGCCC
GCCGCGGTGG CGGTGCGCTG GTGGGCCTAT CTCGCGCCGC TCGAAGCCTA TGATCCCGAA
CACGGGTCGT GGTTTGCGTG GCTCTTCTCC GGCGAGATGC TGCACGACGC GATGGCCTCG
CTCTACCGCG TCGTCGTCGG CTTCGCCGTC GGCGCGGGGC TCGCCCTGCC GCTCGGCCTG
TTCATGGGCT CCAGCGACCT GATCTACCGC CACATCAACC CGTTGATGCA GGTGCTGCGG
CCGATCCCGC CGATCGCCTA CATCCCGCTC TCGATCCTGT GGTTCGGCCT CGGCAACGCG
CCCGCCGTGT TCCTGATCGC CATCGGCGCC TTCTTCCCCG TGCTGATGAA CACCATCGCG
GGCGTGCGGC ATGTGGACGG GATCTATATC CGCGCCGCCC GCAGCCTCGG CGCCAGCCGG
ATGACGATCT TCCGGCGGGT CATCCTGCCG GCCGCCACCC CCTACATCCT GTCGGGGGCG
CGGATCGGCA TCGGCACCGC CTTCATCGTG GTGATCGTGG CCGAGATGAT CGCGGTCAAT
AACGGCCTCG GCTTCCGCAT CCTGGAGGCG CGCGAATATT TCTGGTCCGA CAAGATCATT
GCCGGAATGC TGACCATCGG CGCGCTCGGC CTCGTCATCG ACATGGCGGT GAGCCGCCTG
AACAATCACC TGCTCCGCTG GCATCGCGGC CTGGAATCGT GA
 
Protein sequence
MNALRLKPLA EGMAVPVAIL VIWQLACTAG LVNPMVLPSP AAVAVRWWAY LAPLEAYDPE 
HGSWFAWLFS GEMLHDAMAS LYRVVVGFAV GAGLALPLGL FMGSSDLIYR HINPLMQVLR
PIPPIAYIPL SILWFGLGNA PAVFLIAIGA FFPVLMNTIA GVRHVDGIYI RAARSLGASR
MTIFRRVILP AATPYILSGA RIGIGTAFIV VIVAEMIAVN NGLGFRILEA REYFWSDKII
AGMLTIGALG LVIDMAVSRL NNHLLRWHRG LES