Gene Mext_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1206 
Symbol 
ID5832775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1331708 
End bp1332157 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content70% 
IMG OID641366999 
ProductPAS sensor protein 
Protein accessionYP_001638679 
Protein GI163850636 
COG category[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.490223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.110316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAAT CGCAGACCTT CGACACGTCC GGCCTTGTCG CGGCGATCGG TGACGCGGTG 
GTGATCTCCG ACGCGGACGG ACGGATCGTC GTCTGGAATC CGGCCGCGGA GCGGATCTTC
GGCTTCTCGG AAGCCGAGGC GCTCGGGCAG AGCCTCGACC TCATCACCCC GGAGCGTCAC
CGCCGACGCC ACTGGGACGG CTACGCCAAG ACGATGCGTA CGGGCGAGAC CCGCTACGGC
ACGTCGCTGC TCAAGGTTCC GGCCCTGCAC AAGGATGGCC GGGCCCTGTC GATCGCCTTC
ACCGTCGCGC TGCTGCACGG CGCGTCGGGC GAGGTCACCG GCATCGCCGC GATCATCCGC
GACGAGACCG AGCGCTTTCA GGAAGAGCGC TCCCTGCGCC GCCGCGTGGC GGAGCTGGAG
GAGGCTTTGG GCACCCTCGT CTGCGCCTGA
 
Protein sequence
MAQSQTFDTS GLVAAIGDAV VISDADGRIV VWNPAAERIF GFSEAEALGQ SLDLITPERH 
RRRHWDGYAK TMRTGETRYG TSLLKVPALH KDGRALSIAF TVALLHGASG EVTGIAAIIR
DETERFQEER SLRRRVAELE EALGTLVCA