Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1060 |
Symbol | |
ID | 5833037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1156751 |
End bp | 1157617 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641366855 |
Product | formyl transferase domain-containing protein |
Protein accession | YP_001638536 |
Protein GI | 163850493 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.113837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTCG CCTTTGCCGG CATCGACTTC CTCGGCGGCG TGTTCGACGG GCTGATCGAA GCCGGCTGGA CGCCGGTGAA GCTGTTCACC CGGCCCTGCG ACGGCATCTA CGATCACAAC GAGGTCGTGG TGGCCCAGGC CCGGCGCCAC CGCATCCCGA TCCAGCTCTC GCGAATGCTG CCCGACGACA TCGAGCGGCT TGCGCACGAG CACGGCCGCG ACGTGGTCCT CGTCGTCTCC GGTTATCCCT GGCTCGTGCG GGGCTGGCAC GGGCGGGTGC GCTATGCCCT GAACCTCCAC CCCTCGCCGC TGCCGACGGG ACGGGGCCCC TATCCGCTCT TCAAGGCGGT TCTCGACGGC TACGAGAGTT GGGGCGTCAC CGCCCACGTG CTCGCCGAGC AGGGCTTCGA CACCGGCGAC ATCCTTGCCC AGGACATCTT CCCCCTCGAC GGTCACGAGA CCCACGAGAC GCTGCTCACC AAGTGCCAGA TGGCGGCCCG CCGCCTCGCC CTCGGGCCGA TCGGGAAGGA TCTGGCCGAG CGCTGGCGCA AGGCGGAACC GCAGGGCGAC GGTTCCTACT GGCCGCGGGT GAACGACGCC GACCGCACCC TCGATTTCCA CAAGGACGTC GCCGCGGTGC TGCGCCGCGT GCGCGCCTTC GGCACGATCG AGACCATCGC CCGGCTCGGC AACGCCCGCA TCTTCGTCGC CGCCGCCGAC GGATGGCAAG AGGCCCACCG CCACGCCCCC GGCACCGTGG TGCACCGCTA CCGCCGCCAG GTCGTGGTGG CCGCCCGCGA CGGCTACGTG CAGTTCACCC GCTGGAGCCA GGTGCCCCTC AACGAGGCCG GGCAAATCGG ACGCTGA
|
Protein sequence | MKFAFAGIDF LGGVFDGLIE AGWTPVKLFT RPCDGIYDHN EVVVAQARRH RIPIQLSRML PDDIERLAHE HGRDVVLVVS GYPWLVRGWH GRVRYALNLH PSPLPTGRGP YPLFKAVLDG YESWGVTAHV LAEQGFDTGD ILAQDIFPLD GHETHETLLT KCQMAARRLA LGPIGKDLAE RWRKAEPQGD GSYWPRVNDA DRTLDFHKDV AAVLRRVRAF GTIETIARLG NARIFVAAAD GWQEAHRHAP GTVVHRYRRQ VVVAARDGYV QFTRWSQVPL NEAGQIGR
|
| |