Gene Mext_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1060 
Symbol 
ID5833037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1156751 
End bp1157617 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content70% 
IMG OID641366855 
Productformyl transferase domain-containing protein 
Protein accessionYP_001638536 
Protein GI163850493 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.113837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCG CCTTTGCCGG CATCGACTTC CTCGGCGGCG TGTTCGACGG GCTGATCGAA 
GCCGGCTGGA CGCCGGTGAA GCTGTTCACC CGGCCCTGCG ACGGCATCTA CGATCACAAC
GAGGTCGTGG TGGCCCAGGC CCGGCGCCAC CGCATCCCGA TCCAGCTCTC GCGAATGCTG
CCCGACGACA TCGAGCGGCT TGCGCACGAG CACGGCCGCG ACGTGGTCCT CGTCGTCTCC
GGTTATCCCT GGCTCGTGCG GGGCTGGCAC GGGCGGGTGC GCTATGCCCT GAACCTCCAC
CCCTCGCCGC TGCCGACGGG ACGGGGCCCC TATCCGCTCT TCAAGGCGGT TCTCGACGGC
TACGAGAGTT GGGGCGTCAC CGCCCACGTG CTCGCCGAGC AGGGCTTCGA CACCGGCGAC
ATCCTTGCCC AGGACATCTT CCCCCTCGAC GGTCACGAGA CCCACGAGAC GCTGCTCACC
AAGTGCCAGA TGGCGGCCCG CCGCCTCGCC CTCGGGCCGA TCGGGAAGGA TCTGGCCGAG
CGCTGGCGCA AGGCGGAACC GCAGGGCGAC GGTTCCTACT GGCCGCGGGT GAACGACGCC
GACCGCACCC TCGATTTCCA CAAGGACGTC GCCGCGGTGC TGCGCCGCGT GCGCGCCTTC
GGCACGATCG AGACCATCGC CCGGCTCGGC AACGCCCGCA TCTTCGTCGC CGCCGCCGAC
GGATGGCAAG AGGCCCACCG CCACGCCCCC GGCACCGTGG TGCACCGCTA CCGCCGCCAG
GTCGTGGTGG CCGCCCGCGA CGGCTACGTG CAGTTCACCC GCTGGAGCCA GGTGCCCCTC
AACGAGGCCG GGCAAATCGG ACGCTGA
 
Protein sequence
MKFAFAGIDF LGGVFDGLIE AGWTPVKLFT RPCDGIYDHN EVVVAQARRH RIPIQLSRML 
PDDIERLAHE HGRDVVLVVS GYPWLVRGWH GRVRYALNLH PSPLPTGRGP YPLFKAVLDG
YESWGVTAHV LAEQGFDTGD ILAQDIFPLD GHETHETLLT KCQMAARRLA LGPIGKDLAE
RWRKAEPQGD GSYWPRVNDA DRTLDFHKDV AAVLRRVRAF GTIETIARLG NARIFVAAAD
GWQEAHRHAP GTVVHRYRRQ VVVAARDGYV QFTRWSQVPL NEAGQIGR