| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0813 |
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| Symbol | |
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| ID | 5832321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 883759 |
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| End bp | 886074 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641366595 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001638289 |
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| Protein GI | 163850246 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.179863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.675147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAGCG TGAACCTGCT GATCGCCGAG GAACTCGGTG CGCGCGAGGG GCAGGTGGCG
GCGGCCGTGG ACCTGCTCGA CGGCGGCTAC ACCGTCCCGT TCATCGCCCG CTACCGCAAG
GAGGCAACTG GCTCGCTGGA CGACGCACAG CTCCGCACCC TTGAGGAGCG GCTGGGGTAT
CTGCGCGAGC TGCGCGACCG GCGCACCAGC GTCACCGAGA GCATCCGCGC CCAGGGCAAG
CTGACGCCGG AACTCGCCGC CGCCATCGCC GCCGCCGACA CCAAGGCGCG GCTGGAAGAC
ATCTACCTGC CGTTCCGGCC CAAGCGCCGC AGCAAGGCGC AGACCGCCCG CGAGGCCGGG
CTCGCGCCGT TGGCCGAGAC CCTGCTCGCG CGGCCGGAGA CGGCGCCGGG GCGGGCAGCG
CAGGGCTTCG TCGACGCGGC CAAGGGCATC GAAACCGCCG AGGCGGCCCT GGAGGGCGCC
CGGGCGATCC TGATCGAGCG GTTTGCCGAG GATGCCGACC TGATCGGCCG CCTGCGCGAG
GACTTTTGGC GCGGCGGCGA GGCCGTGGCG AAGGTGCGCA AGGGCCAGGA GACTGCGGGC
CAGAAATTCT CCGACTATTT CGACTGGCGC GAGCGCCTGG AGCGGATGCC CTCGCACCGG
GTGCTGGCGG TGTTCCGCGG CGAAAAGGAG GAGGTGCTCG ACCTCGCCTT CGCCGCGGAG
GGCGAGGATT CCGCGCCCGG CGTGCCGGGG CCGTTCGAGC TCGCCGTCTG CCGCCGGTTC
GGCGTCTCCG CGCGGGGCCG GCCGGCGGAT GCGTGGCTGC TCGACACCGT CCGCACCGCG
TGGCGCACCA AGATCCGCAC CGGCATCAAG GCCGATCTGC GGGCACGCCT GTTCGAGCGG
GCGGAGGAGG CGGCGGTGAA GGTGTTCGCC GGCAACCTCA AGGATCTGCT GCTCGCCGCC
CCGGCGGGCG GGCGGGCGAC GCTCGGGCTC GATCCGGGCT ACCGCAACGG CGTGAAGGCG
GCGGTGGTCG ACCGCACCGG CAAGGTCGTC GCGGTCGAGA CCACCTATCC GCACGAGCCG
CAGCGGCGCT GGAAGGAGGC GGTGGCCTCG CTCTCCCGGC TCTGCCGCCA GCACGGCGTC
GAGTTGATCG CCATCGGCAA CGGCACCGCC TCGCGCGAGA CCGACCGGCT CGCCACCGAG
ATCCTGGCCG CAAACCCTGA TCTCAAGATG GCCAAGGTCA CGGTGTCGGA GGCCGGCGCC
TCGGTGTACT CGGCCTCGGC CATCGCCACC CGTGAGTTGC CCGACCTCGA CGTGTCGCAT
CGCGGCGCCG TCTCCATCGC CCGGCGCCTG CAGGACCCGC TGGCGGAACT GGTGAAAATT
GACCCGAAAT CCATCGGCGT CGGCCAGTAC CAGCACGACG TCACCGAGCA GAAGCTGTCG
CGCTCGCTTC AAGCGGTGGT CGAGGATGCG GTGAACGCGG TCGGCGTCGA TGTGAACACC
GCCTCCGGCC CGCTGCTGGC CCAGGTCTCG GGCCTCGGCG CGTCGGTGGC GGACAAGATC
GTCACCCACC GCGACGCCAA CGGCCCGTTC CGTACCCGCG CCGGACTGAA GAAGGTGCCG
GGCCTCGGCG CCAAGACCTT CGAGTTGGCG GCGGGCTTCC TGCGCATCCC CGATGGCGAG
GACCCGCTCG ACCGCTCCGG CGTCCACCCG GAAGCCTATC CGGTGGTGCG CCGCATCCTG
GAGGCGACGA AGAGCGACAT CCGCGTGCTG ATCGGCAATG CCGCCGCCCT GCGTCCGCTC
TCGCCCGCCG CCTTCGCCGA CGAACGCTTC GGCGTGCCGA CCGTGCGCGA CATCATCGCC
GAGTTGGAAA AGCCCGGCCG CGACCCGCGC CCGGCCTTCA AGACGGCGAG CTTCCAGGAA
GGCGTCGAGA AAATCGGCGA CCTCAGGCCA GGGATGCAGT TGGAGGGCGT CGTCACCAAC
GTCGCGGCCT TCGGCGCCTT CGTCGATATC GGCGTGCATC AGGACGGACT CGTCCACATC
TCGGCCATGG CCCGCAAGCG GATCGCCTCG CCTTCCGAAG TGGTGAAGAC CGGCGACGTG
GTGCGTGTGC TGGTGTTGTC GGTCGATGTG CCGCGCAAGC GCATCGCGCT GTCGATGCGG
CTCGACGACC CCCTTGAGGG CGCAACGGCG CCGCGTGGAA ACGTCCCCCG CCCCGAGGCG
CAGCCCCGGC GCCCGGCGCC CGCAGCCCCG CCGCAGGATG GGGCGCTGGC CGACGCGCTC
CGGCGCGCCG GAGTCTCGTC GTCTAAGCGT TCTTGA
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| Protein sequence | MKSVNLLIAE ELGAREGQVA AAVDLLDGGY TVPFIARYRK EATGSLDDAQ LRTLEERLGY
LRELRDRRTS VTESIRAQGK LTPELAAAIA AADTKARLED IYLPFRPKRR SKAQTAREAG
LAPLAETLLA RPETAPGRAA QGFVDAAKGI ETAEAALEGA RAILIERFAE DADLIGRLRE
DFWRGGEAVA KVRKGQETAG QKFSDYFDWR ERLERMPSHR VLAVFRGEKE EVLDLAFAAE
GEDSAPGVPG PFELAVCRRF GVSARGRPAD AWLLDTVRTA WRTKIRTGIK ADLRARLFER
AEEAAVKVFA GNLKDLLLAA PAGGRATLGL DPGYRNGVKA AVVDRTGKVV AVETTYPHEP
QRRWKEAVAS LSRLCRQHGV ELIAIGNGTA SRETDRLATE ILAANPDLKM AKVTVSEAGA
SVYSASAIAT RELPDLDVSH RGAVSIARRL QDPLAELVKI DPKSIGVGQY QHDVTEQKLS
RSLQAVVEDA VNAVGVDVNT ASGPLLAQVS GLGASVADKI VTHRDANGPF RTRAGLKKVP
GLGAKTFELA AGFLRIPDGE DPLDRSGVHP EAYPVVRRIL EATKSDIRVL IGNAAALRPL
SPAAFADERF GVPTVRDIIA ELEKPGRDPR PAFKTASFQE GVEKIGDLRP GMQLEGVVTN
VAAFGAFVDI GVHQDGLVHI SAMARKRIAS PSEVVKTGDV VRVLVLSVDV PRKRIALSMR
LDDPLEGATA PRGNVPRPEA QPRRPAPAAP PQDGALADAL RRAGVSSSKR S
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