Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0569 |
Symbol | |
ID | 5834460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 625248 |
End bp | 626423 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641366347 |
Product | ABC transporter related |
Protein accession | YP_001638055 |
Protein GI | 163850012 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.569114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGAGGGA GGGGGACGAC CGGGCAAGTC CTCCCGGTTC AGGCTCGTTC GTCGGATCCG CCGCCGTTGT TTCCTCGCCG TAAACCCGCC CCTCCCACGG CCACCGGACA GGACGGCGTG TCGGCTGCAT CGTCATCCGT GCGCCTCGAC ATCCGCGGTG TGAGCCGGCG CTACGGCCGG ATGCTGGCGC TCGACGACGT CTCGCTTTCG CTGTCGGCGG GCGAGATCCT GGCGGTTCTC GGTGATTCCG GGTGCGGGAA GAGCACACTG CTGCGGCTGG TCGCCGGGCT CGATGAACCC GATGCTGGCG AGATTCACAT CGATGGCCGG CGCATGGCCG GTCGCGGCGG CGGCGAACCG CCCGAGACCC GCGGCGTCGG CCTGATGTTT CAGGATTACG CCCTGTTTCC CCACCTCACC GTGCTGGCCA ATGTCCGGTT CGGCCTGAGC CATTTGCCGG GCGCGCGGGC GCGGACCGTG GCGCGGGAGC GCCTCGCCGA GGTCGGTCTG GCGGGTCGTG AGACAAGCTA CCCGGCGACG CTGTCCGGCG GCGAGGCTCA GCGGGTGGCG CTGGCGCGGG CGCTCGCACC GCGTCCCCGG GTGCTGCTCC TCGACGAGCC GTTCTCGAAC CTCGATGCCG GCACCCGAGA GCGGGTTCGT GCCGACACGC TCGCCGTTCT GCGTCAGGAC GGCATCAGCG CCATCCTTGT GACCCACGAC GCCGCCGAGG CCGTCGAGTT CGCCGACCGC ATCGCCCTGA TGCGGAAGGG CCGGTTGATC CAGTGCGACA CCGCCGAAGC CTTGTATCGC GCGCCCGTGA GCCCCTTCGC CGCGAGGGCG CTCGGTGACG TCGTGACGGT GGCGGGCCTC GCCTCCGGCG GCCGTCTGGC GACGCCCCTG GGAACGGTCG CCTTGCCCTC CTCCAGGCCC GACGGAGCCG TGCAGGTCTG CCTGCGGCCG GAGGCGATCC GCATCGTGCC GCGCGGCGAA GGCGTGCCGG GCCGGGTACT GCGCCGCAAC TTTGCCGGCG GGAGCACCCG CATCGACGTT GAGATTCCGG GGCTCGACGA GCCCCTGCGC CTCACCGCGG CGCAGGAGGA TCATGTGGAT GACAGGATCG AGCTGGGGCT CGTCGAAGGC AAGATCCTCG TCTTCACCCA ATGCGAATCC GCTTGA
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Protein sequence | MRGRGTTGQV LPVQARSSDP PPLFPRRKPA PPTATGQDGV SAASSSVRLD IRGVSRRYGR MLALDDVSLS LSAGEILAVL GDSGCGKSTL LRLVAGLDEP DAGEIHIDGR RMAGRGGGEP PETRGVGLMF QDYALFPHLT VLANVRFGLS HLPGARARTV ARERLAEVGL AGRETSYPAT LSGGEAQRVA LARALAPRPR VLLLDEPFSN LDAGTRERVR ADTLAVLRQD GISAILVTHD AAEAVEFADR IALMRKGRLI QCDTAEALYR APVSPFAARA LGDVVTVAGL ASGGRLATPL GTVALPSSRP DGAVQVCLRP EAIRIVPRGE GVPGRVLRRN FAGGSTRIDV EIPGLDEPLR LTAAQEDHVD DRIELGLVEG KILVFTQCES A
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