Gene Mext_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0569 
Symbol 
ID5834460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp625248 
End bp626423 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content71% 
IMG OID641366347 
ProductABC transporter related 
Protein accessionYP_001638055 
Protein GI163850012 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.569114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAGGGA GGGGGACGAC CGGGCAAGTC CTCCCGGTTC AGGCTCGTTC GTCGGATCCG 
CCGCCGTTGT TTCCTCGCCG TAAACCCGCC CCTCCCACGG CCACCGGACA GGACGGCGTG
TCGGCTGCAT CGTCATCCGT GCGCCTCGAC ATCCGCGGTG TGAGCCGGCG CTACGGCCGG
ATGCTGGCGC TCGACGACGT CTCGCTTTCG CTGTCGGCGG GCGAGATCCT GGCGGTTCTC
GGTGATTCCG GGTGCGGGAA GAGCACACTG CTGCGGCTGG TCGCCGGGCT CGATGAACCC
GATGCTGGCG AGATTCACAT CGATGGCCGG CGCATGGCCG GTCGCGGCGG CGGCGAACCG
CCCGAGACCC GCGGCGTCGG CCTGATGTTT CAGGATTACG CCCTGTTTCC CCACCTCACC
GTGCTGGCCA ATGTCCGGTT CGGCCTGAGC CATTTGCCGG GCGCGCGGGC GCGGACCGTG
GCGCGGGAGC GCCTCGCCGA GGTCGGTCTG GCGGGTCGTG AGACAAGCTA CCCGGCGACG
CTGTCCGGCG GCGAGGCTCA GCGGGTGGCG CTGGCGCGGG CGCTCGCACC GCGTCCCCGG
GTGCTGCTCC TCGACGAGCC GTTCTCGAAC CTCGATGCCG GCACCCGAGA GCGGGTTCGT
GCCGACACGC TCGCCGTTCT GCGTCAGGAC GGCATCAGCG CCATCCTTGT GACCCACGAC
GCCGCCGAGG CCGTCGAGTT CGCCGACCGC ATCGCCCTGA TGCGGAAGGG CCGGTTGATC
CAGTGCGACA CCGCCGAAGC CTTGTATCGC GCGCCCGTGA GCCCCTTCGC CGCGAGGGCG
CTCGGTGACG TCGTGACGGT GGCGGGCCTC GCCTCCGGCG GCCGTCTGGC GACGCCCCTG
GGAACGGTCG CCTTGCCCTC CTCCAGGCCC GACGGAGCCG TGCAGGTCTG CCTGCGGCCG
GAGGCGATCC GCATCGTGCC GCGCGGCGAA GGCGTGCCGG GCCGGGTACT GCGCCGCAAC
TTTGCCGGCG GGAGCACCCG CATCGACGTT GAGATTCCGG GGCTCGACGA GCCCCTGCGC
CTCACCGCGG CGCAGGAGGA TCATGTGGAT GACAGGATCG AGCTGGGGCT CGTCGAAGGC
AAGATCCTCG TCTTCACCCA ATGCGAATCC GCTTGA
 
Protein sequence
MRGRGTTGQV LPVQARSSDP PPLFPRRKPA PPTATGQDGV SAASSSVRLD IRGVSRRYGR 
MLALDDVSLS LSAGEILAVL GDSGCGKSTL LRLVAGLDEP DAGEIHIDGR RMAGRGGGEP
PETRGVGLMF QDYALFPHLT VLANVRFGLS HLPGARARTV ARERLAEVGL AGRETSYPAT
LSGGEAQRVA LARALAPRPR VLLLDEPFSN LDAGTRERVR ADTLAVLRQD GISAILVTHD
AAEAVEFADR IALMRKGRLI QCDTAEALYR APVSPFAARA LGDVVTVAGL ASGGRLATPL
GTVALPSSRP DGAVQVCLRP EAIRIVPRGE GVPGRVLRRN FAGGSTRIDV EIPGLDEPLR
LTAAQEDHVD DRIELGLVEG KILVFTQCES A