Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0511 |
Symbol | |
ID | 5832270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 555345 |
End bp | 556511 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641366289 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001637998 |
Protein GI | 163849955 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.791984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTTG TTGTCTCTGA TCTTCTTCAG GGGCGCGGGA GTCGTGCTTC ACCTATGGAA AATCTGGTGC TGATAACGGG TGGAGCGGGC TTCATCGGCC GGCATTTGGC GAGTGCGCTC ATAGCGCGAG ACTATCGGGT CCGCGTACTC GACAGCCTGA TCGAGCAGGT GCACGGCGCA GGCGGCGGGC CCGCCGCTCT CGACCCATCG GTCGAGTTCG TGGAGGGCGA TGTCCGCGAC GGTGAGGCCG TCGCGCGGGC GCTCGACGAC GTGACCCATG TGGTCCACCT CGCGGCGGAA GTCGGCGTCG GCCAGAGCAT GTACGCGGTC GAACGCTACG TCTCGGTCAA CGATTGCGGC ACCGCGGTCC TGTTCCAGGC GATGATCGAG GCGCCGGTGA AGCGCGTCGT CGTGGCCTCT TCCATGAGCA TCTACGGCGA GGGGCTCTAT CGCACCGAAG GCGGCGCCCT CGTCGAGGAC GCGGTGCGAA AGGCCCGCAA GCCCGGCGAG CCCTGGGACC CGCTTGGGGC GGACGGGCAT CCGCTGCGGC CGGTGCCGAC CCCGGAGACC AAGCGCCCTG CGCTCGCCTC GGTCTACGCA CTGACGAAGT ACATGCAGGA GCGCCTGACC CTGACCCTCG CGCCGGCCTA CGGCATGGAG GGCGTCGCGC TCCGGCTGTG GAACGCCTAC GGCCCGGGTC AGGCGCTCTC GAACCCCTAT ACCGGCGTGC TCGCGATCTT CGCCGCCCGC CTCCTGAACG GCCAGCCGCC GATGATCTTC GAGGACGGCG AGCAGAGGCG CGATTTCGTC CATGTCGAGG ACGTGGCCCA GGCCTTCGTG CTCGCGCTCG AACACCCGGC CGCCGTCGGG CAGGTCTACA ATGTCGGCTC GGGCCAGGAC CGCACCGTGA ACGAGGTGGC CCGCCTGCTG GCCCGCGCCA TGGGCCGCGA GGACATCGCT CCCCAGACCA CCGGGCAGGC ACGCCTCGGC GACATCCGCC ACTGCATCGC CGACATCGGA AAGATCACCC GCGAACTCGG CTATGCGCCG AAGCGCGACT TCGCGGAGGG CCTGGCCGAA CTCGCCGCCT GGGTGGCCGA GCAGCAGGCG GTGGACCGCG TCGCCGAGGC GCGGCGCGAA CTCGAAGCGC GGGGGCTCGT CGCGTGA
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Protein sequence | MSFVVSDLLQ GRGSRASPME NLVLITGGAG FIGRHLASAL IARDYRVRVL DSLIEQVHGA GGGPAALDPS VEFVEGDVRD GEAVARALDD VTHVVHLAAE VGVGQSMYAV ERYVSVNDCG TAVLFQAMIE APVKRVVVAS SMSIYGEGLY RTEGGALVED AVRKARKPGE PWDPLGADGH PLRPVPTPET KRPALASVYA LTKYMQERLT LTLAPAYGME GVALRLWNAY GPGQALSNPY TGVLAIFAAR LLNGQPPMIF EDGEQRRDFV HVEDVAQAFV LALEHPAAVG QVYNVGSGQD RTVNEVARLL ARAMGREDIA PQTTGQARLG DIRHCIADIG KITRELGYAP KRDFAEGLAE LAAWVAEQQA VDRVAEARRE LEARGLVA
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