| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0489 |
|---|
| Symbol | |
|---|
| ID | 5831698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 533775 |
|---|
| End bp | 534593 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641366268 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001637977 |
|---|
| Protein GI | 163849934 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.382692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTATG CGAGCATTAT GGTTAGTTTG GACCTTGGGT CTGGTTCGGG CGAGCGAACC
AGGGTGGCCG CCCAGCTCGC GGAGCATTTC CAAGCGCGCC TCATCGGCGT TGCGGCGCGG
GAAATGGACT ACCCACGTGG ATATGCGGAA ACCTCCGTAC TCGGGCGGGA GGCTACGGAG
GAGATCCGCG ATGCCGCTCT GGCGGACGTG GCCGAGGTTG AGGCGGCCTT CCGCCTTGCC
GTGGGTAGCG GCAGACCTAT CGAATGGCGG TCCAACCTCA CGGACCCAGA AATCTTTCTG
GAAGAACAGT CGCGTGCTGC CGATCTCGTC GTCCTGGGGC GGCGCGGTGG CCAAGATCTT
TCCGACCCCC GCTTGGCGGT CAACGCTGGA AGAGCCCTGA TGGGGCTAGG CCGGCCCGTT
CTCATGGTGC CGCCCGGTGT TGATCACCTC TCGCTCAAAC GTGTCGTGGT CGCCTGGAAG
AACACCCTTC AGACACGTCG CGCGATCTCG GACGCGATGC CCCTACTGAA AGTCGCCCAG
CAGGTTCAAG TCGTGAGGAT CACCACTGAC GAGGACAATG AGGACTTGGA GGATGTGGTC
CGATACCTCG GATTGCATGG CGTGAACGCC TCGGCCTTCC GTAAGTCGCA GAATGGCGCC
AGCGTCGCCT TGGCCTTGGA AGAGGCGGCG AAAGCCTTCG GTGCAAGTCT GATCGTCAGC
GGAGCCTACG GTCACAACCG CCTGCGTGAA TGGTTCTTTG GCGGGGTGAC CCGCGCGTTG
CTCAACCACT GCTCGGTCTG CTGCCTGATG TCTCACTGA
|
|---|
| Protein sequence | MTYASIMVSL DLGSGSGERT RVAAQLAEHF QARLIGVAAR EMDYPRGYAE TSVLGREATE
EIRDAALADV AEVEAAFRLA VGSGRPIEWR SNLTDPEIFL EEQSRAADLV VLGRRGGQDL
SDPRLAVNAG RALMGLGRPV LMVPPGVDHL SLKRVVVAWK NTLQTRRAIS DAMPLLKVAQ
QVQVVRITTD EDNEDLEDVV RYLGLHGVNA SAFRKSQNGA SVALALEEAA KAFGASLIVS
GAYGHNRLRE WFFGGVTRAL LNHCSVCCLM SH
|
|---|
| |