Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0319 |
Symbol | |
ID | 5832690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 355706 |
End bp | 358813 |
Gene Length | 3108 bp |
Protein Length | 1035 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641366104 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001637814 |
Protein GI | 163849771 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0134136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATG GCCCGATGTC TGCTCCGCGC TTTCAGGCCG CCTACGCCCC GGATGATGCT GCTTTGGCGG AGGCATTGCT GCGTGAGGCA CCCCTGCCGG CGGCCACGGA GGCGGCGGTC GATCGGCTCG CGGCCGACCT GATCGGCGCG ATCCGCGCGG ATGCCAGCCA CGGCGCCGTC GAGGCGTTGC TGCGGGAATA TGCGCTGACG ACCCGCGAAG GGCTTGCCCT CATGACCCTC GCCGAGGCGC TGCTGCGGGT GCCCGATGCG GCCACCGCCG ACCGGCTGAT CGCAGACAAG CTGCGCGAGG GCGATTTTGT CCATCACGCG GTGCGTTCGG AGAGCGGCCT CGCCCATGCC GCGTCCTGGG CGCTTGGCCT CGGCGCCCGG CTCGTCGGCC CACAGGACAC CCCCGAGGCG ACCTTGGGAA GCATGGTCCG CCGCCTCGGC CGCCCGGCCG TACGCGCGGC GGCCCACCGT GCGATGCGGG TGATGGGCGG GCAATTCGTG TTGGCCGAAG AGATCGGCGC GGCGCTCAAG CGAGCCGGCT CGGGCACTGC CCGCCGTTCC CGCTTCTCCT TCGACATGCT CGGCGAGGGC GCCCGCACGG CGGACGACGC CGAGAGCTAC CGCCAGGCCT ATGCCCGCGC CATCGCCCGG ATCGGGCGGG AAGCCGGCAA CGCCCCGCTC CCGGCCCGGC CAGGCATCTC GGTGAAGCTC TCGGCGCTGC ATCCGCGCTA CACCCCGACG CAAGGGGCGC GAGTGATGGC CGAACTGGTG CCGGTGGTGC GCGACCTCGC CCGCGACGCC CGCGCGCATG ACCTCAACTT CACCCTCGAC GCCGAGGAGG CGGAGCGGCT CGAACTCTCC CTCGACGTGT TCGAGGCCGT GCTGGCCGAT CCGGCTTTGG CCGGCTGGGA CGGATTCGGC CTCGCGATTC AGGCCTATTC GAAGCGTTGC CTTCCCGTGA TCGACTACAT CGCAGAACTC GCCGAGCGGT ACGACCGGCG GCTGATGGTG CGCCTCGTCA AGGGCGCCTA CTGGGACACG GAAGTGAAGC TCGCCCAGAC GCAAGGGACG GTCGACTACC CCGTCTTCAC CCGCAAGGCG ATGACGGACC TGAACTATCT GGCTGCCGCC CGGCGGCTGC TGGCGCTGCG CCCGCGCCTC TACCCGCAAT TCGCGACGCA CAACGCGCAG ACCGTGGCGA GCGTGCTCGG TCTGGCCGGG CTGCTCGATC GTCCCGCGGA CGAGGAGGCC GGCTTCGAGT TCCAGCGCCT GCACGGCATG GGCGAGGCGC TCTACCAGCG GCTCACCGAG CGGGCGCCGG GCGTCGGCCA GCGGGTCTAC GCGCCCGTCG GCGGCCACCG CGAGTTGCTC GCCTATCTCG TCCGCCGGCT GCTGGAGAAC GGGGCGAACT CCTCGTTCGT AGCCCGCGCC GCCGATCCCT CGGTGCCGGC GGCCGAACTG CTGGCCCGGC CTCAGGCCCT GGTGGAGACG CCGTCGCAGG CCCGCCACCC CAAGATCCCG CTGCCGCGCG ACCTGTTCGG GCCTGAGCGC CGCAATTCTC CGGGGCTCGC CTTCGGCGAC GGCGCTGCGC TGCGACGGTG GACCGATGCC GTCGCGCGGG CCGCCGGCCC CGCCGAGGCC GCGCCGATCA TCGACGGCGC CGTCCAGACC GGCCGCGCCC GCCCGGTGAA CAGCCCCATC GACGGCGCGG CCCTCGGTAG CGTCATCGAG GCGGACCCCG CCACCGCCGC GCTCGCCATG GAGGCGGCCG CGCGCGGCTT CCCCACCTGG GCCGCGACGC CCGCCCGCGA GCGTGCCGCC TGCCTGGAAC GGGCGGCCGA CGCCTTCGTG CGGGAGCAGG GACGGCTCCT GCACCTGCTG CAAGCCGAGG CCGGCAAGAC CCTCGACGAC GCCGTGGCCG AGTGGCGCGA GGCGATCGAC TTCCTGCGCT ACTACGCGGC GCAGGGCCGG GATCTGTTCG GCGAACCGCA GGACCTGCCC GGCCCGGCGG GCGAGGCTAA CAGCTTGCGC CTCGTCGGCC GGGGCGTGTT CGTCGCCGTC TCGCCCTGGA ATTTCCCGCT CGCGATCTTC ACCGGGCAGG TCGCGGCGGC GCTGATGGCC GGCAACGCCG TCGTCGCCAA GCCTGCGCCG CAGACGCCGC TGGTGGCGGA CCTTGCCGTG CGCCTGCTCC ATGCAGCCGG CGTTCCGGGG AGCGCCCTTC ACCTCGTCCC CGGCGGTCCG GAGACCGGCG CCGCACTGAT CGAGCATCCC GCTCTGGCCG GCGTCGTCTT CACCGGTTCC ACCGCGACGG CGCAGCGGAT CAACCGGGCG CTCGCCGCCC GCGACAGCGC GATCCTACCG CTGATCGCCG AGACCGGCGG CATCAACGCG ATGATCGTCG ATGCCACGGC GCTTCCCGAG CAGGTGGCCG ACGACGTGGT GGTCTCGGCT TTCCGCTCCG CCGGCCAACG CTGCTCGGCC CTGCGCCTGC TCCTCGTGCA GGAGGATGTC GCCGACCGGA TGATCGCGGC CGTGGCCGGG GCGGCGCGGG AGCTGACGGT CGGCGACCCC CGCGATCTGG CCACCGATCT CGGTCCGGTG ATCGACGCGG GCGCCAAGCA ACGGCTCGAC GCGCATATCG CGGCCATGAC CACCTCGGCG CGGCTGCACT ATGCCGGTGC GGCGCCGGGC GGCCTCACCG TGGCACCTCA TATCTTTGAA ATCGGCGGCG TCGCCGACCT ACGGGAGGAG GTGTTCGGGC CCATCCTCCA TGTCGCCCGA TACCCGGCGG ACGGCCTTGG CTCGGTCCTC GCGGCGATCC GGGCCGGCGG CTACGGGCTC ACCCTCGGCA TCCATTCGCG GATCGAGGAA ACCGCCGAGC GCATCGCCGA GGCCCTGCCG CACGGCAACG TCTACGTGAA CCGCAACATG ATCGGCGCCG TCGTCGGCAG CCAGCCCTTC GGCGGCTCCG GCCTGTCGGG CACCGGCCCG AAGGCCGGCG GTCCCCATTA TCTCGCCCGC TTCGCCATGG AGCGGACGCT CACCGTCAAC ACCGCCGCGG CGGGCGGCAG CGTCGGCCTC ATCACCCTGG AGGGGTGA
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Protein sequence | MTDGPMSAPR FQAAYAPDDA ALAEALLREA PLPAATEAAV DRLAADLIGA IRADASHGAV EALLREYALT TREGLALMTL AEALLRVPDA ATADRLIADK LREGDFVHHA VRSESGLAHA ASWALGLGAR LVGPQDTPEA TLGSMVRRLG RPAVRAAAHR AMRVMGGQFV LAEEIGAALK RAGSGTARRS RFSFDMLGEG ARTADDAESY RQAYARAIAR IGREAGNAPL PARPGISVKL SALHPRYTPT QGARVMAELV PVVRDLARDA RAHDLNFTLD AEEAERLELS LDVFEAVLAD PALAGWDGFG LAIQAYSKRC LPVIDYIAEL AERYDRRLMV RLVKGAYWDT EVKLAQTQGT VDYPVFTRKA MTDLNYLAAA RRLLALRPRL YPQFATHNAQ TVASVLGLAG LLDRPADEEA GFEFQRLHGM GEALYQRLTE RAPGVGQRVY APVGGHRELL AYLVRRLLEN GANSSFVARA ADPSVPAAEL LARPQALVET PSQARHPKIP LPRDLFGPER RNSPGLAFGD GAALRRWTDA VARAAGPAEA APIIDGAVQT GRARPVNSPI DGAALGSVIE ADPATAALAM EAAARGFPTW AATPARERAA CLERAADAFV REQGRLLHLL QAEAGKTLDD AVAEWREAID FLRYYAAQGR DLFGEPQDLP GPAGEANSLR LVGRGVFVAV SPWNFPLAIF TGQVAAALMA GNAVVAKPAP QTPLVADLAV RLLHAAGVPG SALHLVPGGP ETGAALIEHP ALAGVVFTGS TATAQRINRA LAARDSAILP LIAETGGINA MIVDATALPE QVADDVVVSA FRSAGQRCSA LRLLLVQEDV ADRMIAAVAG AARELTVGDP RDLATDLGPV IDAGAKQRLD AHIAAMTTSA RLHYAGAAPG GLTVAPHIFE IGGVADLREE VFGPILHVAR YPADGLGSVL AAIRAGGYGL TLGIHSRIEE TAERIAEALP HGNVYVNRNM IGAVVGSQPF GGSGLSGTGP KAGGPHYLAR FAMERTLTVN TAAAGGSVGL ITLEG
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