| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0119 |
|---|
| Symbol | |
|---|
| ID | 5834631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 125064 |
|---|
| End bp | 125693 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641365904 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_001637618 |
|---|
| Protein GI | 163849575 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4973] Site-specific recombinase XerC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAG TTGTCACTGT TCCCACCAGC ACACGTGTTC CCTGGAACCG CGGCCGTATC
GTCGGACTCA AACAGCCGCT GAAGCCGAAG CACATTTGGG CTCTGCGCAC GCGCCTCCGG
CTCGCCAACC GCACGCGAGA CCTTGCCCTG TTCAACCTTG CCGTCGACAG CAAGCTACGC
GGGTGTGATC TCGTCCGCCT GCGCGTGAGC GACATTCATC TGGGTGACGC TGTGCGTCTC
CGAGCAACCG TCTGCCAGCG CAAGACCGGC AGGCCGGTCC CGTTCGAGAT CACCGAACCG
ACGCGCGAGG CTCTTAAGGC TTGGCTGACT GCGCGCAGGT TGAAAGCCGG CGACTGGCTG
TTCCCGAGCC GCAGCCGACT CGGAGAGCAT TTAACGACGC GGCATTACAG TCGGCTGGTA
GACCGCTGGG TTGCCCTGAT CGGCCTGGAC CCTTCGGCGT TCGGCACGCA CAGCCTGCGC
CGCACGAAGG TCGCGCTGGT CTATAAGCGC ACCGGCAATA TCCGAGCCTG CCAACTGCTC
CTTGGCCATA CCAAGCTGGA GAGCACGGTT CGCTATCTCG GCATTGAGGT TGACGACGCG
CTGATCCTCT CAGAGCAGAC CGAAATCTGA
|
|---|
| Protein sequence | MPEVVTVPTS TRVPWNRGRI VGLKQPLKPK HIWALRTRLR LANRTRDLAL FNLAVDSKLR
GCDLVRLRVS DIHLGDAVRL RATVCQRKTG RPVPFEITEP TREALKAWLT ARRLKAGDWL
FPSRSRLGEH LTTRHYSRLV DRWVALIGLD PSAFGTHSLR RTKVALVYKR TGNIRACQLL
LGHTKLESTV RYLGIEVDDA LILSEQTEI
|
|---|
| |