Gene Mext_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0113 
Symbol 
ID5832277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp121179 
End bp121661 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content66% 
IMG OID641365898 
ProductPAS sensor protein 
Protein accessionYP_001637612 
Protein GI163849569 
COG category 
COG ID 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTGA CCATCGTAGA ACTCGTGAGG ATGTTTGCTG AGCCGCTCGA CCTGGCGATC 
GTGCTGACCG ACATCGATCT GGAGCGGCCG GGACCGACGA TCCTGTACGC CAATCCCGCG
TTTGCGCGCA TGAGCGGATA CGCGGCTCAA GAGGTACTGG GGAACTCGCC GCGCCTGCTC
CAGGGCTCTG GCACAAGCCG TGAGGCGACC CGCATGGTTG CGCGCGCCCT GCGCGCTGAG
GGCCGCTTTC GTGGGGTGCT GCAGAACTAC CGCAAGTCCG GCGAGGCGTA CCTGTGTGAG
ATCGACGTGC GAGCAATCCT TGATCGTGCG GGCCGGCCGG AGGTCTTTAT TGCCTTTGAG
CGGGAGGTGG TGCGCCGCAG AGGCCGACCA TCGCTTGACG CTGCTGGCCG CTATCGACCC
CTGACACAGA CCAGCCCGGC CTGCCCGGCG CCACTGAGCG CTGGAACAGA CCTGTTCACC
TGA
 
Protein sequence
MTVTIVELVR MFAEPLDLAI VLTDIDLERP GPTILYANPA FARMSGYAAQ EVLGNSPRLL 
QGSGTSREAT RMVARALRAE GRFRGVLQNY RKSGEAYLCE IDVRAILDRA GRPEVFIAFE
REVVRRRGRP SLDAAGRYRP LTQTSPACPA PLSAGTDLFT