Gene Mevan_1425 details

Gene Information

• Locus tag: Mevan_1425
• ID: 5324807
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus vannielii SB
• Kingdom: Archaea
• Replicon accession: NC_009634
• Strand: +
• Start bp: 1456692
• End bp: 1457258
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640787121
• Product: DNA-directed RNA polymerase subunit E'
• Protein accession: YP_001323933
• Protein GI: 150400166
• COG category: [K] Transcription
• COG ID: [COG1095] DNA-directed RNA polymerase, subunit E'
• TIGRFAM ID: [TIGR00448] DNA-directed RNA polymerase (rpoE), archaeal and eukaryotic form

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTACAAAA TTTTAACAAT TTCTGATACC GTAAGAGTTC CGCCAAAAAT GTTTGGAACG 
CCTTTAAACG ATAACGTGAA AAGGGTTTTA ATGGATAAAT ACGAAGGAAT TCTCGATAAA 
GATGTAGGAT ACGTTCTTTC AATAGTTGAC ATAAATCAGG TAAGTGATGG AAGCATTATA 
TATGGGGACG GTGCAGCTTA TCACGAAACA AAATTTGACG TTCTTACATA CGTTCCAGAA 
CTTCACGAGG TTGTTGAAGG GGAAATCGTT GACGTTGTTG AATTCGGTGC TTTTATTAGG 
CTTGGGCCCC TTGACGGTTT AATCCACATT TCGCAGATTA TGGATGATTT TGTAAGTTTT 
GACCCAAAAA GAGAAGCAAT TATTGGGAAA GAAACAGGTA AAGTTTTAGA AAAGGGAGAT 
TTTGTAAGGG CAAGAATTGT TGCAGTAAGC TTAAAAGAAG AAAAAAAGAG AGGAAGCAAA 
ATTGCACTTA CAATGAGACA ACAAAGCCTT GGAAAATTAG AATGGCTTGA AGAACAGGTA 
GTAAAAAATA AAAAGGAAAA AAATTAG 

 

Protein sequence

MYKILTISDT VRVPPKMFGT PLNDNVKRVL MDKYEGILDK DVGYVLSIVD INQVSDGSII 
YGDGAAYHET KFDVLTYVPE LHEVVEGEIV DVVEFGAFIR LGPLDGLIHI SQIMDDFVSF 
DPKREAIIGK ETGKVLEKGD FVRARIVAVS LKEEKKRGSK IALTMRQQSL GKLEWLEEQV 
VKNKKEKN