| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1405 |
|---|
| Symbol | |
|---|
| ID | 5325136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | + |
|---|
| Start bp | 1439050 |
|---|
| End bp | 1439766 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640787101 |
|---|
| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
|---|
| Protein accession | YP_001323913 |
|---|
| Protein GI | 150400146 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATAA TTCCCGCAGT TGATATGAAA AATAAAAAGT GCGTGCAACT TATACAGGGA
AATCCTGATA AAAAACACGT GGAACTTGAT AATCCTCCTG AAATTGCAAA AAAATGGGTT
GAACAAGGTG CTGAAATGCT TCATCTTGTT GACCTCGATG GTGCAATAAA TGGAAAGCGT
GTAAACGACG AATTTATTGA AGAAATAATC AAAAATTCAG GAGTTCCCGT TCAAATTGGT
GGGGGGATAA GGAGCGTTTC AGATGCACTT TATTTTATTG AAAAGGGTGC AGAAAAAGTG
ATACTTGGAA CAGTTGCAAT TCAAAATCCT AAAATCGTTC GTGAAATCTC CAGTATTGTG
GGAAAGGAAA AAGTAACAGT TGCACTCGAT GCAAAAGACG GTAAAGTATT AATAAAAGGT
TGGACTGAAA AAACGGACTA TAGTCCAGTT CAAATTGGAA AAATACTTGA AAATATGGGT
GCAGGAAGTA TTTTATTTAC AAATGTAGAT AGTGAAGGAC TACTTGAAGG TATTAATGTT
TTACCAACAA AAGAACTTGT TGATAATCTA AACATTCCAA TAATTGCCTC AGGCGGAGTT
ACAACCGTTG AAGACCTCTT AAAATTTAAA GAAATCGGAG TTTATGCAGT TGTAGTTGGT
TCAGCACTTT ATAAAGATAT GATAAACTTA AAAGATGCAA TTTTAGCATC GAAATAG
|
|---|
| Protein sequence | MLIIPAVDMK NKKCVQLIQG NPDKKHVELD NPPEIAKKWV EQGAEMLHLV DLDGAINGKR
VNDEFIEEII KNSGVPVQIG GGIRSVSDAL YFIEKGAEKV ILGTVAIQNP KIVREISSIV
GKEKVTVALD AKDGKVLIKG WTEKTDYSPV QIGKILENMG AGSILFTNVD SEGLLEGINV
LPTKELVDNL NIPIIASGGV TTVEDLLKFK EIGVYAVVVG SALYKDMINL KDAILASK
|
|---|
| |