Gene Mevan_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMevan_1071 
Symbol 
ID5325358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus vannielii SB 
KingdomArchaea 
Replicon accessionNC_009634 
Strand
Start bp1087002 
End bp1088081 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content31% 
IMG OID640786747 
ProductFO synthase subunit 2 
Protein accessionYP_001323583 
Protein GI150399816 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 
TIGRFAM ID[TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTAA TTTCCTTTAA AGAAAAGGAT ATTTCAAAAA AAGAGTGCCT AGAATTATTT 
TTAGATACTG AAAACTTTTT TGATATTTTA AAAGTTGCAG ATGATATTAG AAAGGAATCT
GTTGGGGATA CGGTTACTTA CGTCTTAAAT GCAAATATAA ACTTTACAAA CGTTTGCAGT
GGAACGTGTA AATTTTGTGC ATTTAAAACT GAAAAAGAAG ACCCTAACTC ATTTTTTTTA
AATCCTGATA AGGTTGCAGA AAAAGCACTT TTAGCAAGAA AAACGGGGGC TACTGAAGTA
TGTATTCAAG GTGGGCTCTT ACCAGAAATT GACACATATT TTCAGGCGGA AATTTTACAA
AAAGTTAAAA AAATTACTGA AAAATATGGC GGAATTGATA TACATGCCTT TTCACCAATG
GAAGTTAAAT CAGCTGCTGA AAATTGTGGA TTAAATGTAA AAGAAGCTTT AAAAATTTTA
AAAGATAGCG GGCTTAAAAC AATGCCTGGA ACCGCTGCAG AAATATTAAA TGATGAAATA
AGAAACGAAA TATGCCCTAC AAAACTAACC ACATCAGAAT GGATAGATGT TGTAAAGACG
GCCCATAAAA ACGGCATTAA AACAACTTGT ACAATGATGT ATGGCCATAT TGAAGAAAAC
GTGCATTTAG TAGAACATTT ATCAATTTTA AAGGAAATTC AAAAAGAAAC TTCTGGATTT
ACAGAATTCG TTCCTTTAAC ATTTTTGCAT GAAAATGCGC CTCTTCACCA TATTGGAAAG
GTTAAAAGCG GGGCTTCTGG AATTTTGGAT TTAAAAGTTT ATGCGATTTC TAGAATATTT
TTTAAAAATT ACTTAAAAAA CATACAGACA TCATGGGTAA AATTGGGAAT TAAATTAAGC
CAAATTTCAC TAAATTGCGG TGCTAATGAT GTTGGTGGGA CACTAATGGA AGAAAGTATT
TCAAAGGCTG CCGGAGGGAG CTTTGGAACG TGTATGAGTG AAGAAAAATT GAAAAATATG
ATTTTAAACG TAAATAAAAT CCCAAAAAAG AGAAATACAC TTTATGAATT AATTAATTAA
 
Protein sequence
MDLISFKEKD ISKKECLELF LDTENFFDIL KVADDIRKES VGDTVTYVLN ANINFTNVCS 
GTCKFCAFKT EKEDPNSFFL NPDKVAEKAL LARKTGATEV CIQGGLLPEI DTYFQAEILQ
KVKKITEKYG GIDIHAFSPM EVKSAAENCG LNVKEALKIL KDSGLKTMPG TAAEILNDEI
RNEICPTKLT TSEWIDVVKT AHKNGIKTTC TMMYGHIEEN VHLVEHLSIL KEIQKETSGF
TEFVPLTFLH ENAPLHHIGK VKSGASGILD LKVYAISRIF FKNYLKNIQT SWVKLGIKLS
QISLNCGAND VGGTLMEESI SKAAGGSFGT CMSEEKLKNM ILNVNKIPKK RNTLYELIN