| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0341 |
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| Symbol | |
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| ID | 5325909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | + |
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| Start bp | 390113 |
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| End bp | 393358 |
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| Gene Length | 3246 bp |
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| Protein Length | 1081 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640786005 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001322862 |
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| Protein GI | 150399095 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.756805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAGAG AGGATATAAA TAAAGTAATG ATTTTGGGTT CTGGACCAAT TGTAATAGGT
CAAGCAGCTG AATTTGACTT TTCAGGTTCT CAGGCTTGTA AATCCTTAAA GGAAGAGGGA
ATTTACACGA TATTGGTAAA TTCAAACCCT GCAACGATTC AGACTGATTC AAATATTGCT
GACAGAGTTT ATTTAGAGCC TTTGACTCCA AAAATTTTAG AAAAAATTAT TGAAAAGGAA
AAACCCGATG CAATACTCCC AACAATGGGT GGCCAAACCG GTTTAAACCT TGCAATGGAG
CTTTCAAAAA GGGGAATTTT AGAAAAACAC GGTGTTGAGC TTTTGGGTTC AACTGAAAAA
GTAATTGAAA CTTCAGAAGA TAGGGACTTA TTTAATAAGG CAATGGAGGA AATAAAACAG
CCAATTGCGA AATCTGCCGC AGTTAACTCA ATTGAAGGGG CACTTAATGC AGTGGATGTT
TTAGGGTATC CCGTAATTGT AAGGCCTGCA TTTACACTAG GGGGAACCGG TGGTGGCGTT
GCAAATACTG AAGAAGAATT AATTGAAATT ACAAAAAAAG GTTTGAAATA TTCTATGATA
AAACAGGTTT TAATCGACCA AAGCCTCCTA GGTTGGAAAG AATACGAGTA CGAAGTAATG
AGGGATAGAA ACGATACATG TATTGTAGTT TGTAACATGG AAAATATCGA CCCTATGGGA
ATACATACTG GTGAAAGCAT CGTTACAGCA CCTTCGCAAA CATTAAGCGA TGAATTCCAC
CAAAAATTAA GAGATGCTGC AATAAATATT ATAAGACATT TGAAAATAGA GGGGGGATGT
AACGTCCAAT TTGCAGTTAA TCCTGAAATG ACCGAATACG TGGTAATTGA GGTAAATCCA
AGAGTTTCAA GAAGTTCTGC ACTTGCAAGT AAAGCAACGG GTTATCCAAT TGCAAAGATT
GCTGCAAAGA TTGCAATTGG ACTTACACTT GACGAAATCC AAAATGACGT TACAAAAGAA
ACCCCTGCAA GTTTTGAACC TACTATCGAC TACGTTGTTG TAAAAATTCC AAGATGGCCA
TTTGATAAAT TTAAAACAGT TGATAAACGA CTTGGAACTG CAATGAAATC AACTGGGGAA
ATAATGGCAA TTGGAAGGAC TTTAGAAGAG GCACTTCAAA AAGCAGTTCG AAGTTTAGAT
ATTGGAAGAT ATGGGATTAT TTCGGATAAA AAAGATAGAG ATTACTCGAA TTCTGAGATT
ATAGGACTTT TGGAAAAACC TACGGATGAA AGGCTCTTTG TAATTGCATA CGCCCTTGAT
AAGGGTTGGA GCGTCGATGG AATTTGTGAA AGAACAAGCA TTAATCCATT CTTTATTAAA
AAAATTAAAA ATATTGTAGA TTGTAAAAAA GAACTTGAAG TAGTTTCAAG ACTCCCAGTA
GACAATGACA AGCTAAAAGA AATAATTTTA AAAGCCAAAA AATTAGGATT TTCAGATTTT
CAGATTGGAA AAATATTTTC AAAAACAGAA ACAGAAATAC GGGAATTAAG AAAAAAACTT
TCCGTAATCC CAGTTTACAA AATGGTAGAT ACTTGTGCAG CAGAATTTGA AGCAAAAACT
CCATACTACT ATTCTGCATA CGAACGATAC TTTGACGAAG AACAAAACGA AAGTATTGCA
ACAAGTCGTA AAAAGGTAAT CATACTAGGT TCAGGGCCAA TTAGAATTGG TCAGGGTGTT
GAATTTGATT ATTCAACAGT TCATGCAATT TATGCATTAA AAGAAATAGG AATTGAAGCA
ATTATAATAA ATAATAACCC TGAAACAGTA AGTACCGACT ACGATACGTC AGACAGGCTT
TACTTTGAAC CATTAGTGTT TGAAGAAATA ATGAATATTA TTGAAAATGA AAGTAAAAAT
GGAGAACTTT TAGGCGTAAT TGTCCAATTT GGAGGCCAAA CCGCAATTAA CCTTGCAATG
AATTTATATG GTGCAGGTGT TAATATTTTA GGAACTTCAC CGCATTCGAT TGACCTTGCA
GAGGATAGGG ATCAATTTAT CCATGTTCTT GAAAAGTTAG AAATACCGCA AGCAGAAGGC
GGAACTGCAT TTAGTGAAGA AGAAGCCCTT AAGGTCATTG AAAAAATCGG GTTTCCAGCA
CTTGTAAGGC CATCTTATGT TTTAGGCGGG CGTGCAATGC AGATTGTTTA TAATTTTGAG
GATTTAAAAG ATTACATGAA TGAAGCAGTT AAAGTTTCAT CAGAACATCC AATATTAATC
GACAAGTTCT TAGAAGAGGC TATTGAAGTC GATGTTGATG CAGTTTGTGA TGGGGAAAGT
GTATTTATCG GCGCTATTAT GGAACATATT GAGGAAGCTG GAATTCATAG CGGAGATAGT
GCATGCGTAA TTCCGCCACA AACGCTATCA AAAGAGGTAA TTTCAAAAAT TGAAACATAT
ACCACTAAAC TTGCACTTGA ACTTGGCGTA ATAGGCCTTT TAAATATCCA ATATGCGATA
AAAGATGGAA TAGTTTATAT AATTGAAGCA AACCCTAGAG CGTCACGAAC TATTCCTTAC
GTCAGTAAAT CAGTTGGTGT GCCATTAGCA AAAATTGCTA CAAATGCACT TATGGGTAAA
AAATTAAAAG AAATGGGTTA TTTTGGAACT GCAAAGGCGA AATACGTTAG TGTAAAAGAA
GCAGTGTTTC CATTCTTAAA ACTTCCAGGG GTTGACCCAG TTTTAAGTCC TGAAATGAAA
TCAACTGGTG AAGCAATTGG AATTGACCTC GATTTTGGAA AAGCATACTA TAAATCCCAG
CTTTCTGCAA ACATGGAACT TCCAACATCT GGAACCGTAT TTATAAGTGT TAGAAATAGG
GATAAAAATA ATATTACAAA AATTGCAAAA AAATTCCATG AATTAGGTTT TGAAATCGTT
GCAACAACTG GGACTGCAAG AGAATTGCGA CAATTTGAAA TTCCTGCAAG GGAAGTTAGT
AAAATTTCTG AAAGTATGCA AAACAGTGTT CTTGATTTGA TGCAGAAAGG AGACATTAGT
TTAATAATAA ATACATCATC AGGAGACCGA GCAAGAAGTG ATGGGTATTA TATAAGGCGA
GCTGCAGTAG AATTAAACGT TCCATACATG ACTACACTTC AAGGAGCATA TGCTGCAATA
AAGGCGATTG AAGCTATTAA AACTGGCGAC CTTGGAGTTT ATTCATTAAA AGAGCTTGAA
AATTAA
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| Protein sequence | MKREDINKVM ILGSGPIVIG QAAEFDFSGS QACKSLKEEG IYTILVNSNP ATIQTDSNIA
DRVYLEPLTP KILEKIIEKE KPDAILPTMG GQTGLNLAME LSKRGILEKH GVELLGSTEK
VIETSEDRDL FNKAMEEIKQ PIAKSAAVNS IEGALNAVDV LGYPVIVRPA FTLGGTGGGV
ANTEEELIEI TKKGLKYSMI KQVLIDQSLL GWKEYEYEVM RDRNDTCIVV CNMENIDPMG
IHTGESIVTA PSQTLSDEFH QKLRDAAINI IRHLKIEGGC NVQFAVNPEM TEYVVIEVNP
RVSRSSALAS KATGYPIAKI AAKIAIGLTL DEIQNDVTKE TPASFEPTID YVVVKIPRWP
FDKFKTVDKR LGTAMKSTGE IMAIGRTLEE ALQKAVRSLD IGRYGIISDK KDRDYSNSEI
IGLLEKPTDE RLFVIAYALD KGWSVDGICE RTSINPFFIK KIKNIVDCKK ELEVVSRLPV
DNDKLKEIIL KAKKLGFSDF QIGKIFSKTE TEIRELRKKL SVIPVYKMVD TCAAEFEAKT
PYYYSAYERY FDEEQNESIA TSRKKVIILG SGPIRIGQGV EFDYSTVHAI YALKEIGIEA
IIINNNPETV STDYDTSDRL YFEPLVFEEI MNIIENESKN GELLGVIVQF GGQTAINLAM
NLYGAGVNIL GTSPHSIDLA EDRDQFIHVL EKLEIPQAEG GTAFSEEEAL KVIEKIGFPA
LVRPSYVLGG RAMQIVYNFE DLKDYMNEAV KVSSEHPILI DKFLEEAIEV DVDAVCDGES
VFIGAIMEHI EEAGIHSGDS ACVIPPQTLS KEVISKIETY TTKLALELGV IGLLNIQYAI
KDGIVYIIEA NPRASRTIPY VSKSVGVPLA KIATNALMGK KLKEMGYFGT AKAKYVSVKE
AVFPFLKLPG VDPVLSPEMK STGEAIGIDL DFGKAYYKSQ LSANMELPTS GTVFISVRNR
DKNNITKIAK KFHELGFEIV ATTGTARELR QFEIPAREVS KISESMQNSV LDLMQKGDIS
LIINTSSGDR ARSDGYYIRR AAVELNVPYM TTLQGAYAAI KAIEAIKTGD LGVYSLKELE
N
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