Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mevan_0110 |
Symbol | |
ID | 5325198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus vannielii SB |
Kingdom | Archaea |
Replicon accession | NC_009634 |
Strand | + |
Start bp | 121246 |
End bp | 122250 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640785777 |
Product | CRISPR-associated RAMP Cmr6 family protein |
Protein accession | YP_001322635 |
Protein GI | 150398868 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1604] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
TIGRFAM ID | [TIGR01898] CRISPR-associated RAMP protein, Cmr6 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.548091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATG ATTCAAACTA CGTCGGAAAC ATTGGTTATT ACTACCAAAA ACTCCAATTT TTAGGAAACG AAGGGGAAAA GAAAGAATGG GGAGAGATTT CAAAAGGAAA AGATAATCGG GATAAAATCG AAACGTTGAA AAAAGAAATC GAAACAAACG AGGAAAAACT TAAAAAAATT TCATTTCATT TTGAAAATGA AAAGATATTG AACTATAAAC CAGAACACAA TAACTACGAC TTAAAGGAAA TAAAAATTGA ACGATTAATA TTTAAAACAA CTTATCCTGG ACTTTTGGTT GGTTCAGGTT TAAACCATGA AGTGGGTGCA GATGAATTTA AACTCGGATT TTCATTTGAT TACACGTCAG GACTTCCAGT AATCCCAGGA TCATCAGTAA AGGGGGTTTT GAGAAGTGCA TTTCCAAATG ACGAAAAAGA TCCTAAATTT CAATACATAA AAGATAAGTT AGCCACCTTT GGAGTAAATT CTGAAGATAT TAACGTTTTA GAATTAAAAA AAGAAATATT TGATGGAATA AAAGAAGAAA ATGGCGATAA GAATATTCGA TTTAATGAAA GAGATATATT TTTTGATGCC GTTTTAACCG ATAATAACAA TGATAAACAT ATATTTGGGG AAGACTATAT CACACCGCAT TCTGATCCAC TAAAAAACCC AATTCCCGTG AAATTTTTGA AAATTTTACC TGAAATTGAA TTTGAATTCA GATTTTTATT AAATGACAGT AAAGTAAATG ATAAAATAAC TGCAAACGTT AAAAAAGAAT TATTTAAGCA GATTTTATGT GATCTGGGAG TTGGTGCAAA AACTAACGTT GGATACGGAA ATCTGATTTC CACAAATTTG TCTTCGAAAA ATTTGGACAA AAAAACAGAA AAAAGTGCCG ATAAAAAAAC AGCCCCTGAA AAAGCAGGTG CCGATGAAAC CTCATGGCAA GATGAATATA CGAAAAAGAC CGGAAAAAAA GTTAAAAATA AATAA
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Protein sequence | MTNDSNYVGN IGYYYQKLQF LGNEGEKKEW GEISKGKDNR DKIETLKKEI ETNEEKLKKI SFHFENEKIL NYKPEHNNYD LKEIKIERLI FKTTYPGLLV GSGLNHEVGA DEFKLGFSFD YTSGLPVIPG SSVKGVLRSA FPNDEKDPKF QYIKDKLATF GVNSEDINVL ELKKEIFDGI KEENGDKNIR FNERDIFFDA VLTDNNNDKH IFGEDYITPH SDPLKNPIPV KFLKILPEIE FEFRFLLNDS KVNDKITANV KKELFKQILC DLGVGAKTNV GYGNLISTNL SSKNLDKKTE KSADKKTAPE KAGADETSWQ DEYTKKTGKK VKNK
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