Gene Meso_4539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_4539 
Symbol 
ID4178502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008243 
Strand
Start bp103331 
End bp104494 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content59% 
IMG OID638059425 
Productmandelate racemase/muconate lactonizing-like protein 
Protein accessionYP_666147 
Protein GI110347330 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCA TCGACATTCG TGAAACCACC CAGCCGATCG CCTCGCCGAT CCGGAACGCC 
TATATCGATT TTTCGAAGAT GACGACCAGT CTTGTGGCTG TCGTGACCGA TGTCATGCGC
GATGGCCGCA GGGTTGTCGG CTATGGATTC AACTCCAACG GCCGCTATGG CCAAGGGGGA
TTGATCCGCG AGCGTTTCCG CGATCGGGTT CTGCAAGCCG ATCCGTCGAC GCTGATCGAC
GATGACGGCA CCAACCTGGA TCCTTTCCGC ATCTGGAAGA CGATGATGGC GAACGAGAAG
CCCGGCGGTC ATGGGGAGCG GTCCGTCGCT GTAGGCACCG TCGACATGGC GATTTGGGAT
GTTGTCGCCA AGATTTCAGG AAAGCCTCTC TTCCGGCTTC TCGCCGAAAT GAAGGGACGC
GAGGCTGATC CCCGCGTGTT CGTCTATGCC GCCGGCGGCT ACTATTATCC TGGCAAGGAT
CATTCGGCCT TGCGGGCCGA GATGCGCAGT TATCTCGACC GCGGCTACAC CGTTGTCAAA
ATGAAGATTG GCGGCGAAGC GATCGACGAG GATCGCCGCC GCATCGAAGC CGTCTTGCAG
GAGATCGGTT CCGAAGCGCA ACTGGCGGTG GATGCCAATG GCCGTTTCGA TCTTGAGACT
GCGATCGCCT ATGCCAAGAT GCTGCGGGAC TATCCGCTCT TCTGGTATGA GGAAGCAGGC
GATCCACTGG ATTATGCATT GCAGGCGGCA CTGACTGAGT TTTATCCAGG ACCGATGGCC
ACCGGCGAGA ACCTTTTCTC CCATCACGAC GCTCGCAATC TCCTGCGCTA TGGTGGCATG
CGGCCCGATC GCGACTGGCT GCAGTTTGAC TGTGCGCTTT CCTATGGACT CGTCGAGTAT
CTGCGCACCT TGGACGTGCT GCAGCAGTTC GGCTGGTCTG CGTCGCGCTG TATCCCGCAT
GGCGGCCATC AGATGTCGCT CAATATCGCC GCGGGCCTTG GTCTCGGCGG CAATGAAAGT
TATCCCGACC TGTTCCAGCC TTATGGCGGC TTTCCGGACA CCGTGAAGGT GGAGGATGGT
CACATCGTCA TGCCCGATCT GCCGGGCATC GGTTTTGAAG GAAAGTCCGA CCTGATCAAA
GTCATGCGGG CGCTTGCGGA ATAG
 
Protein sequence
MRIIDIRETT QPIASPIRNA YIDFSKMTTS LVAVVTDVMR DGRRVVGYGF NSNGRYGQGG 
LIRERFRDRV LQADPSTLID DDGTNLDPFR IWKTMMANEK PGGHGERSVA VGTVDMAIWD
VVAKISGKPL FRLLAEMKGR EADPRVFVYA AGGYYYPGKD HSALRAEMRS YLDRGYTVVK
MKIGGEAIDE DRRRIEAVLQ EIGSEAQLAV DANGRFDLET AIAYAKMLRD YPLFWYEEAG
DPLDYALQAA LTEFYPGPMA TGENLFSHHD ARNLLRYGGM RPDRDWLQFD CALSYGLVEY
LRTLDVLQQF GWSASRCIPH GGHQMSLNIA AGLGLGGNES YPDLFQPYGG FPDTVKVEDG
HIVMPDLPGI GFEGKSDLIK VMRALAE