| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4508 |
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| Symbol | |
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| ID | 4178491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008243 |
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| Strand | + |
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| Start bp | 72426 |
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| End bp | 73748 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638059395 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_666117 |
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| Protein GI | 110347300 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACA TAGCCTTAAG TACAATTTTC CTCATCGTAG CGATGCTTGT TCTTTTGTGC
AGCGGGATGT GGATATTTCT TGCTCTGACC TTTCTGGGCG CGTTGGGGCT TTGGTGGGTG
GCAGGGTTCC CGATTGACCG CATTGGCCTC CTCCTCCAGA CTACGTTCTG GAACAGTTCC
AAGATGTGGG AGCTTTCGGC GGTACCCCTC TTTGTTTGGA TGGGAGAAAT ATACTATCGA
ACAAATTTGG CGGCAGAATT GTTTCGCGGG ATCGCTCCCC TTATCAAGTG GCTGCCTGGC
AAGCTGCTTC ATTCCAATGT CATCGGATGT ACCGCCTTCG CGGCAGTCAG CGGTTCGTCC
GCGGCCACCA CTGCCACGAT CGCAAGGATA ACGTTGCCAG TACTGGCAGC GAGCGGCTAT
TCGCGCAATC TTGCGCTCGG CTCGCTGGCG GGCGCGGGTA CTCTCGGGAT ACTGATTCCA
CCATCGACAG CTCTTATAAT ATACGGTGTG CTGGCCGAAG TATCCATAGC GGATCTATTT
GTCGCTGGTA TCGTGCCGGG TCTTATGGTT GCAGGGCTGT CGTCGCTCTT TATTATGATC
GTTGCCTTGA TAAATCCGTC GGTAGCCGGC TCAGTGCAGT CGGAGCGGGG CGACAGCGAT
CGGGTTTCGT TCTTGTCCTT GCTTTCTGAT GTCGTGCCTA CGGCCAGCGT ATTTGTCGTG
ATCATGGGGT CGATCTATCT CGGCTTGGCG ACGCCATCTG AGTCAGCAGC CATTGGTCTG
GCAATGACGG TCGTGATAGC AGCACTCAAG CGACGTTTCA GTTTCGCAGT ATTGGCGCAA
GCTTTGGCAA GTGCGATCCG CACGTCCTGC ATGGTGTGCA TATTATTGGT GTCGGCCGCC
TTTCTTACGT CGGCGATGAG TTTCATGCAT TTGCCTAACC AGATCGCCGA CGCAATCGGT
CAGATGCATT TGCCACCTCT ACAATTGATC CTAATCTTGG CTGTATTCTA TCTGGTGCTT
GGGATCGTGG TCGACGGCCT GCCCATAATG GTAATGACCT TGCCTTTCGT CTATCCGCTC
GTGACGGCGC TCGGATACGA TCCGCTTTGG CTGGGCATTT TTATCATTCT CAATATCGAG
ATGGGGATGA TATCACCTCC CGTCGGTCTG AACCTATTTG TCTTGAAAGG GCTTACCGGC
GAATCGATCG GCAGGATCGG ATTTGCTGCA TTACCATTCT TCGCTGTAAT GTGCGTGGTG
ACGGCGCTAA TTTCTATTTT TCCGGAACTC GTACTATGGT TACCCTCGCT GGCGATCAAT
TAA
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| Protein sequence | MSDIALSTIF LIVAMLVLLC SGMWIFLALT FLGALGLWWV AGFPIDRIGL LLQTTFWNSS
KMWELSAVPL FVWMGEIYYR TNLAAELFRG IAPLIKWLPG KLLHSNVIGC TAFAAVSGSS
AATTATIARI TLPVLAASGY SRNLALGSLA GAGTLGILIP PSTALIIYGV LAEVSIADLF
VAGIVPGLMV AGLSSLFIMI VALINPSVAG SVQSERGDSD RVSFLSLLSD VVPTASVFVV
IMGSIYLGLA TPSESAAIGL AMTVVIAALK RRFSFAVLAQ ALASAIRTSC MVCILLVSAA
FLTSAMSFMH LPNQIADAIG QMHLPPLQLI LILAVFYLVL GIVVDGLPIM VMTLPFVYPL
VTALGYDPLW LGIFIILNIE MGMISPPVGL NLFVLKGLTG ESIGRIGFAA LPFFAVMCVV
TALISIFPEL VLWLPSLAIN
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