| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4385 |
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| Symbol | |
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| ID | 4178809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008242 |
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| Strand | + |
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| Start bp | 285703 |
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| End bp | 287058 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638059278 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_666000 |
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| Protein GI | 110347182 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.484161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCAAGCG ACACATGGCT TCGCGCCGTC CCTTGGCTGG AGAGTGCCGG AATCCTGCCG
GCGAGCGCCG GTCCCGCACA ATCGGGACCT GTCATCTATT ACCGCGATCC GGACGGACAG
CCCTTCTATT CCGCCGTGCC GAAGAAGACC GCCAACGGCC GGGATTTCCT CGCGGTTCAT
GCCGACGAGG ACGTGAGCTT TGAGGAGAAG CCGGGGAACA AGGAAGTAGC AGCCGCACCC
GCCAATGGTG GCGCGAAGCG CGTGCTGTAC TACCGCAACC CGATGGGTTT GCCCGACACC
TCGCCGACAC CCAAGAAGGA TTCGATGGGG ATGGATTACA TCCCCATTTA CGAGGGTGAG
GACGAGGATG GCTCTTCGGT TAAGGTCGCT CCGGGTAAGC TGCAGCGGAC CGGCGTGAGG
ACGGAGGCCG CCACCGAAAG GGTGATCGTC AATCCGGTGC GCGTGCCGGG AACGGTGCAA
CTTGACGAGC GGCGCGTGAC CGTCGTCGCA ACACGCTCGG ACGCTTTCAT CAACACTGTC
GCGAGCGTGA CCACTGGCGA TCGCATCGCC AAGGGCCAAG CCCTTCTTCA GCTCTATTCG
CCCGAGGTCG CCGTGGCCGG TGCGCAGTTG CTGACCGTCC TCAACGGCAG CGGATTGAGC
GATGGCCTCG GTGGCGCGCG TCAGCGGCTT GAAAATCTCG GTGTCCCTTC CGGGGCGATC
GCTGAGATCG AGCGGACACG CAAGGTGCCG CTTTCGATGA CATGGCGGGC ACCCCGCGAC
GGCATCGTGC TTCAGCGGAA TGCTGTGGAG GGGATGAAGG CCGCACCCGG CGATATCCTC
TTTCGGCTTG CTGACGTATC GACCGTCTGG GTCGTGGCGG ACGTGCCCGA GTACCAGCTC
GCCGCGGTCA AGCTCGGGGC GGCCGCCACC ATCCGGCTGC GCGGTCGGCC GGGCCAGAGC
TTCACTGGCC ACGTCGCTCT GATTTATCCG CAGGTCGCGA CGGACACCCG CACGACGAAG
GTGCGGATCG AAATCCCGAA CCCGTACGGC ACCCTGCTGC CGGATATGTA TGCCGATGTC
GAGATCGCCA GCGGCAGCGG CGCTGAGGTC GTGGCCGTTC CCGACAATGC GGTGATCGAC
ACCGGAAGCC GGCAGGTCGT CATCGTGGAC AAGGGCGACG GCCGCTTTGA GCCGCGGCAG
GTTCAGGTTG GTCAGCAGGG CGGCGGATTC ACCGAAATCC GCTCCGGCAT CGCGGCCGGC
GACAAGATCG TTGTTGCAGC GAACTTCCTG ATCGATGCGG AAAGCAATCT CAAGGCCGCC
TTGAACGGCA TGACAAGCGC GGAGGCGACA CCATGA
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| Protein sequence | MPSDTWLRAV PWLESAGILP ASAGPAQSGP VIYYRDPDGQ PFYSAVPKKT ANGRDFLAVH
ADEDVSFEEK PGNKEVAAAP ANGGAKRVLY YRNPMGLPDT SPTPKKDSMG MDYIPIYEGE
DEDGSSVKVA PGKLQRTGVR TEAATERVIV NPVRVPGTVQ LDERRVTVVA TRSDAFINTV
ASVTTGDRIA KGQALLQLYS PEVAVAGAQL LTVLNGSGLS DGLGGARQRL ENLGVPSGAI
AEIERTRKVP LSMTWRAPRD GIVLQRNAVE GMKAAPGDIL FRLADVSTVW VVADVPEYQL
AAVKLGAAAT IRLRGRPGQS FTGHVALIYP QVATDTRTTK VRIEIPNPYG TLLPDMYADV
EIASGSGAEV VAVPDNAVID TGSRQVVIVD KGDGRFEPRQ VQVGQQGGGF TEIRSGIAAG
DKIVVAANFL IDAESNLKAA LNGMTSAEAT P
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