| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4368 |
|---|
| Symbol | |
|---|
| ID | 4178794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008242 |
|---|
| Strand | + |
|---|
| Start bp | 268583 |
|---|
| End bp | 269548 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638059263 |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_665985 |
|---|
| Protein GI | 110347167 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCG TACCGGAGCG TCTGATCTCC GACCTCATGA GCGAGGCCGC TGTCTTTGAA
GCCATCGAAA GCGTCTTCGC TGCCATGGCG CGAGACGAGG CCCGTAACTT CCCCGTCATC
CGAGAGGCGA TCGGCTATGC CGACGCGCTC TACGGCTTCA AGGCTGGCTT CGACAGTGCG
GGGCTCGTCC TTGGGGTCAA GGCGGGCGGC TACTGGCCGG GCAACATGGC GAAGGGCTTG
ACCAACCACC AGTCCACGGT GCTGCTGTTC GACCCGGACA CCGGCCGGAT CAAGGCGGCG
GTCGGCGGTA ACCTGCTGAC CGCGCTGCGC ACGGCCGCCG CCTCGGCGGT GTCGATCAAG
CATCTGGCCC GCCCCGACGC CCGCGTGCTC GGCATGGTCG GGGCCGGTCA CCAGTCCGCC
TTCCAGATGC GCGCCGCAGT GCGGGCGCGC AAATTCGACA AGGTGGTTGG TTGGAACTTG
CACCCCGAAA TGCTGTCGCG GCTGGCCGAC ACGGCGGTCG AACTCGGCCT GCCTTTCGAG
GTGGTCGACC TGCCACAACT CGGGGCACAG GCCGATGTCA TCATCACGAT CACATCCAGC
TTCGCACCGA TTCTTCTTTC CGGGCATATT CGCCCAGGAA CCCATCTCGC TTGCATGGGG
ACCGACACTA AAGGGAAGCA GGAAGTAGAG GCGGCTCTTT TCCCACGCGC TCGGCTCTTT
GCCGATGAGG TTGAACAGTC CGTCACCATC GGTGAGGCGC AGCACGCGGT GGCGCAGGGA
TTGATCGCGA CCGGCGACAT CACGCCGCTC GGCGCGGTGA TCGCCGGCCT GGCGCCGGGG
CGGACCTCGC CGGAGGAGAT CACGTTGTTC GACGGCACGG GCGTTGGCCT CCAGGATCTC
GCGGTGGCGT CAGTTGCGGT GGATATTGCT CGGGCGCGAG GGCTCGCCCT GGAAGTGGAG
CTTTAG
|
|---|
| Protein sequence | MIIVPERLIS DLMSEAAVFE AIESVFAAMA RDEARNFPVI REAIGYADAL YGFKAGFDSA
GLVLGVKAGG YWPGNMAKGL TNHQSTVLLF DPDTGRIKAA VGGNLLTALR TAAASAVSIK
HLARPDARVL GMVGAGHQSA FQMRAAVRAR KFDKVVGWNL HPEMLSRLAD TAVELGLPFE
VVDLPQLGAQ ADVIITITSS FAPILLSGHI RPGTHLACMG TDTKGKQEVE AALFPRARLF
ADEVEQSVTI GEAQHAVAQG LIATGDITPL GAVIAGLAPG RTSPEEITLF DGTGVGLQDL
AVASVAVDIA RARGLALEVE L
|
|---|
| |