Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4348 |
Symbol | |
ID | 4178832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008242 |
Strand | - |
Start bp | 249648 |
End bp | 249947 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638059243 |
Product | VIRB2 type IV secretion |
Protein accession | YP_665965 |
Protein GI | 110347147 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTAT CGGCTCGCAT AAGGCCATTC GCGGCGACCG CGACGATGGC GGCGGTATTT TCCCTGTCCT TGGTCGAGCC GAGCTTCGCC CAGGCGGGCG GCATCGAAAG TGTGCTGCAG AATATCGTCA ACATGCTCAC CGGCAATGTC GCCAGACTGC TGGCCATCAT CGCCGTGATC ATTGTCGGGA TCGCATGGAT GTTCGGCTAC CTCGATCTTC GCAAGGCGGC GTTTGTCGTG CTTGGCATCG GAATCATCTT CGGTGCGACC GAGATCGTCA ACATGATCTC AGGAGGCTAG
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Protein sequence | MNLSARIRPF AATATMAAVF SLSLVEPSFA QAGGIESVLQ NIVNMLTGNV ARLLAIIAVI IVGIAWMFGY LDLRKAAFVV LGIGIIFGAT EIVNMISGG
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