Gene Meso_4348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_4348 
Symbol 
ID4178832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008242 
Strand
Start bp249648 
End bp249947 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content58% 
IMG OID638059243 
ProductVIRB2 type IV secretion 
Protein accessionYP_665965 
Protein GI110347147 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3838] Type IV secretory pathway, VirB2 components (pilins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTAT CGGCTCGCAT AAGGCCATTC GCGGCGACCG CGACGATGGC GGCGGTATTT 
TCCCTGTCCT TGGTCGAGCC GAGCTTCGCC CAGGCGGGCG GCATCGAAAG TGTGCTGCAG
AATATCGTCA ACATGCTCAC CGGCAATGTC GCCAGACTGC TGGCCATCAT CGCCGTGATC
ATTGTCGGGA TCGCATGGAT GTTCGGCTAC CTCGATCTTC GCAAGGCGGC GTTTGTCGTG
CTTGGCATCG GAATCATCTT CGGTGCGACC GAGATCGTCA ACATGATCTC AGGAGGCTAG
 
Protein sequence
MNLSARIRPF AATATMAAVF SLSLVEPSFA QAGGIESVLQ NIVNMLTGNV ARLLAIIAVI 
IVGIAWMFGY LDLRKAAFVV LGIGIIFGAT EIVNMISGG