| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4346 |
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| Symbol | |
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| ID | 4178830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008242 |
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| Strand | - |
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| Start bp | 246932 |
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| End bp | 249313 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638059241 |
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| Product | type IV secretion/conjugal transfer ATPase |
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| Protein accession | YP_665963 |
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| Protein GI | 110347145 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.677673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTAGTA CCGCGACCGT CAGGAGCCGT GAGCTCGAAC CCGAGACCTT CATCCCCTAC
GTCCGCCACA TCGATGAACG GGTGATCGCG CTTGACTCCC GTGCCCTGAT GGTGGTCATC
GCGCTCGAAG GCGTGTCGTT CGAGACGGCC GACACGCTGG ACCTCAATGC GCTGCACCGG
GACCTCAACA CGCTCTACCG CAACATCGCG GATGAGCGGC TGGCGCTGTG GACGCATGTC
GTTCGGCGAC GCGACAACGA GTATCCTGAC GGCGAATTCG CGAACGCCTT CTCGCGCACG
CTGAACGACA AGTACCGCAA CCGCATGATC GGCGAGGACT TGTTCCGCAA CGATCTGTAT
CTCAGCCTCG TATGGCACCC GGGCAAGGAT GCAGCCGAGC GGGTGGCAGC GTTCCTGTCG
AGATTGCGCA AGGCGCGGCG ACGCGGGGTG GAGCTTGATG TGGATGCCCT CAAGCGTCTC
GACGACACCA TCGTCGACGT TACAGCCGGC CTGAAGCGTT TCGGCCCGCG CGTTCTCACC
CTTCAAGAGC GCGACGGCCT TGTCTTCTCG GAGCCGAGCG AAGTGCTGCA CCAACTGGTG
GGCGGCCGCC GTGAAGCCGT GCCGCTGACC GAGGGCCGCG TTTCATCGGC AATTTATTCC
GACCGCGTCA TTGTCGGACG CGAGACGGTC GAGATCCGTC ACGAAGGATC GAGCCGTTAT
GCAGGCATGT TCGGTTTCAA GGAATATCCG GCCCGCACGC GGCCCGGCAT GTTCGATGGC
TTGTTGACCG TCCCCTATGA ACTGATCCTG ACCCAGAGCT TCTCATTCCT GTCGAAGTCA
GATGCGAAGA CGGTGATGGG ACGCAAGCAG AACCAGATGG TCAGCGCCGG CGACAAGGCC
GGGTCGCAGC TCGAGGAGCT CGATGATGCG CTGGACGATT TGGAATCCAA CCGCTTCGTG
CTGGGTAACC ATCACTTGAC GCTTACGGTC TTCGCCGGAA CGGTGAGGGA ATTAACGGAC
AATCTGGCGA AGAGCCGAAC CCATCTGACC AACGGCGGCG CGGTCGTTGC GCGCGAGGAT
CTCGGGCTGG AAGCGGCCTG GTGGGCGCAG CTTCCCGGCA ACTTCCGCTA TCGCGTCCGC
TCCGGCGCGA TCACCTCGAA GAATTTCGCG GCCTTTTCGC CGTTTCATTC CTATCCGGTC
GGTCAGCGCG ACGGCAACGA ATGGGGACCT GCCGTTGCCA TGCTGAAGAC GGCGTCGGGA
TCTCCGCTCT ATTTCAATCT TCACTATGGC GATCTCGGCA ACACCTTCAT CGGCGGACCT
TCCGGCTCTG GCAAGACGGT GCTGCTCAAC TTCATCCTGT CGCAGGGCGA GAAGTTTGAT
GCCAATATTG TGTTTTTCGA CAAGGACCGC GGCGCCGATC TTTTCGTGCG CGCCGCCGGC
GGCACATACC TGCCGCTAAA AAATGGCCGG CCGACCGGCT GTGCCCCGCT GAAGGGCATG
GAACTGACGC CGGAGAACAA AGTGTTTCTG GCGCAATGGG TGACCAAGCT TGTCGGCTCG
AAAACGCGAG AACTCTCCGT CGCGGAAACC CGCGACATCG CCAATGCCAT CGATGGGCTC
GCCGATCTGC CGGTAGAGCG GCGCACGATC GGCGCGCTGC GCACCTTTCT CAACAACACC
GATCCCGAAG GCATCGCATC TCGATTGCGC CGCTGGGAGA GGGGAGGGCC GCTCGGTTGG
GTATTCGATA ACGTCATTGA GGACATTGGC CTTGGAGACT TCGGTGTTGG CGGCAAGTTC
GTCGGCTATG ACATGACCGA CTTCCTCGAC AATGAGGAAA TCCGCACGCC GCTGATGGCC
TATCTCTTCC ACCGGGTCGA GCAGCTGATC GACGGCCGCC GCATCATCAT CGTGATCGAT
GAGTTCTGGA AGGCGCTTGC CGACGAAGGC TTTCGCGATC TCGCCCAGAA CAAGCTCAAG
ACCATCCGCA AACAGAATGG GCTCATGCTG TTCGCCACGC AAAGCCCGCG CGATGCGATC
AACTCTCCGA TTGCGCACAC CATCATCGAG CAGTGCCCCA CCCAGGTCTT CATGCCCAAC
TCGCGTGGCA GTCGAGCCGA CTACGTCGAC GGCTTCAAGC TCACCGAACG GGAATATGAG
CTGATCGCAC GGGAGCTCTC CAACGAGAGC CGCCGCTTCA TCGTCAAGCA GGGTCATAAC
AGCGTCGTCG CCGAGCTCAA TCTCGGCGGC TTCGACGACG AACTCGCCGT GCTCTCCGGT
CGCACCGCCA ACGTCGAACT TGCCGATACG ATCCGGGCGG AGACCGGCGA CGATCCGGAA
GCATGGCTTC CTCTCTTCCA GCAGCAAAGG AGTGCAGGCT GA
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| Protein sequence | MPSTATVRSR ELEPETFIPY VRHIDERVIA LDSRALMVVI ALEGVSFETA DTLDLNALHR
DLNTLYRNIA DERLALWTHV VRRRDNEYPD GEFANAFSRT LNDKYRNRMI GEDLFRNDLY
LSLVWHPGKD AAERVAAFLS RLRKARRRGV ELDVDALKRL DDTIVDVTAG LKRFGPRVLT
LQERDGLVFS EPSEVLHQLV GGRREAVPLT EGRVSSAIYS DRVIVGRETV EIRHEGSSRY
AGMFGFKEYP ARTRPGMFDG LLTVPYELIL TQSFSFLSKS DAKTVMGRKQ NQMVSAGDKA
GSQLEELDDA LDDLESNRFV LGNHHLTLTV FAGTVRELTD NLAKSRTHLT NGGAVVARED
LGLEAAWWAQ LPGNFRYRVR SGAITSKNFA AFSPFHSYPV GQRDGNEWGP AVAMLKTASG
SPLYFNLHYG DLGNTFIGGP SGSGKTVLLN FILSQGEKFD ANIVFFDKDR GADLFVRAAG
GTYLPLKNGR PTGCAPLKGM ELTPENKVFL AQWVTKLVGS KTRELSVAET RDIANAIDGL
ADLPVERRTI GALRTFLNNT DPEGIASRLR RWERGGPLGW VFDNVIEDIG LGDFGVGGKF
VGYDMTDFLD NEEIRTPLMA YLFHRVEQLI DGRRIIIVID EFWKALADEG FRDLAQNKLK
TIRKQNGLML FATQSPRDAI NSPIAHTIIE QCPTQVFMPN SRGSRADYVD GFKLTEREYE
LIARELSNES RRFIVKQGHN SVVAELNLGG FDDELAVLSG RTANVELADT IRAETGDDPE
AWLPLFQQQR SAG
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