| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4081 |
|---|
| Symbol | |
|---|
| ID | 4182781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 4390603 |
|---|
| End bp | 4391754 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638069977 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_676613 |
|---|
| Protein GI | 110636405 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA TACAGGCGAA GGCACAGGTG GAGAGGGTGC GCGAGGAAGT ATCGCGGCCC
TGGCTTTCAC CCATCAACCA ACGCCGCTGG CAGAATTTCA AAGCAAACAA GCGCGGTTAC
TGGTCCTTGT GGCTCTTTCT GGCGCTGTTC ATTCTCTCGC TTTTCGCCGA GTTCATCGCC
AACGACAAAC CCATTATCGC CTCCTACAAG GGAGAAACCC TTTTCCCCGT TCTGGTTGAT
TACCCGGAGG AAAAGTTCGG CGGCTTTCTC GCCGTGACGG ATTACAGAGA TCCTTTCATC
CAGGACGAGA TCAATGCGAA TGGCTGGATG ATCTGGCCGC CGATCCGCTA TTCCTACCGC
ACGGTCAACA GCGAAATACC GGAAGCCGCG CCCGCGAAGC CCTCCTGGCT CTACACGAAA
GAGGAGCGCT GCAGCCGCTA TCCGCAGGGG GTGGACGACC CGAACTGCGT CATCGGCAAC
TGGAACTGGC TGGGCACCGA CGATCAGGCG CGGGACGTGC TCTCACGCGT GATCTACGGC
TTCCGCATCT CAGTCCTGTT CGGCCTGGTT CTCACCGCGC TCTCCGCCAT GATCGGCGTG
TCGGCCGGCG CGATCCAGGG CTATTTCGGC GGCTGGACGG ACCTGCTCTT CCAGCGCTTC
ATCGAAATTT GGTCCTCTAT ACCCGTACTC TACCTCATCC TTATCATCGC CGCGGTGCTG
CCGCCGGGCT TCTGGATTCT TCTCGGCATA ATGCTGCTCT TTTCCTGGGT GGCTTTTGTC
GGCGTCGTCC GGGCGGAATT CCTGAGGGCA CGCAATTTCG AATATGTGAG CGCCGCCCGC
GCTCTGGGCG TGCGCAATCG CACGATCATG TTCCGCCATC TTCTGCCAAA TGCGATGGTT
GCGACACTCA CCTTTTTGCC CTTCATCCTG AACGGCTCGA TCACGACGCT GACTTCGCTC
GATTTCCTGG GTTTCGGCCT TCCGCCCGGC TCCCCCTCAT TGGGCGAGCT CCTTCGCCAG
GGCCAACGCA ATCTGAATGC GCCCTGGCTC GGCATTACCG GCTTCCTTAC TTTGTCGATC
ATGCTCTCGC TGCTCATCTT TGTCGGCGAG GCGGTGCGTG ACGCCTTCGA TCCGCGGAAG
ACATTCCGAT GA
|
|---|
| Protein sequence | MSEIQAKAQV ERVREEVSRP WLSPINQRRW QNFKANKRGY WSLWLFLALF ILSLFAEFIA
NDKPIIASYK GETLFPVLVD YPEEKFGGFL AVTDYRDPFI QDEINANGWM IWPPIRYSYR
TVNSEIPEAA PAKPSWLYTK EERCSRYPQG VDDPNCVIGN WNWLGTDDQA RDVLSRVIYG
FRISVLFGLV LTALSAMIGV SAGAIQGYFG GWTDLLFQRF IEIWSSIPVL YLILIIAAVL
PPGFWILLGI MLLFSWVAFV GVVRAEFLRA RNFEYVSAAR ALGVRNRTIM FRHLLPNAMV
ATLTFLPFIL NGSITTLTSL DFLGFGLPPG SPSLGELLRQ GQRNLNAPWL GITGFLTLSI
MLSLLIFVGE AVRDAFDPRK TFR
|
|---|
| |