Gene Meso_4017 details

Gene Information

• Locus tag: Meso_4017
• Symbol: hrcA
• ID: 4182815
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 4321798
• End bp: 4322868
• Gene Length: 1071 bp
• Protein Length: 356 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 638069913
• Product: heat-inducible transcription repressor
• Protein accession: YP_676549
• Protein GI: 110636341
• COG category: [K] Transcription
• COG ID: [COG1420] Transcriptional regulator of heat shock gene
• TIGRFAM ID: [TIGR00331] heat shock gene repressor HrcA

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAAC CGGTGGCTGA CCAGTCGCTT CAATCGCTTG ACGCGCGCTC GCGTGATATT 
TTTCGCTTGA TCGTCGAAAG CTATTTGCAG CGCGGCGAGC CGGTAGGCTC GCGCAACCTG 
TCGCGGCTTT TGCCGACCCA GCTTTCGCCG GCAACCATAC GCAATGTCAT GAGCGACCTG 
GAGCATCTGG GCCTCATTTA TGCGCCGCAT GTCTCCGCGG GCCGTCTTCC AACCCAGCAG 
GGGCTCCGCT TTTTTGTCGA TGCCTTCATG GAGGTCGGAG ATCTTTCCGA GGAGGAGCGG 
CGCGTTATCG AAGCGCAGAT CAAGGCTTCC GGGCGCGGCC AGTCGCTGGA CCACATGCTG 
ACGGAAGCAA GCCAGATGCT ATCCGGTCTC TCCCGCGGTG CAGGCCTCGT GCTTGCGGCC 
AAGACCGAGG CGCCCCTCAA GCACATCGAA TTCATCCAGC TGGAGCCGCG AAAGGCATTG 
GCAATTCTCG TCTCGCAGAA TGGAGACGTG GAAAACCGGG TGATTGAATT GCCCGCAGGC 
GTCACGGCTT CGCAGCTGGT GGAAGCCTCC AACTTTCTCA ACGCGCATAT TCGCGGCCGG 
ACGTTGGCGG AAGCCAAGTC AGAGATGGCA CGGCTGAAAG AAGAGACACG GGAAGCGCTC 
GACAGCCTTT CCCAATCGCT GGTAGAACAG GGGCTTGCAA TTTGGGCCGG GGCGGAAAGC 
GACACGCCGG CCCGCATTAT CATCCGCGGC CGTGCCAACC TGCTTGAAAA TGTCACCGCC 
CAGGCTGATC TCGAGCTCTT GAGGCATCTT TTCGATGATT TGGAAACCAA GGAAGCGCTC 
ATCCAGCTTC TCGGATTGGC GGAGGAAGGG CCGGGCGTGC GGATTTTCAT CGGCTCGGAA 
AACAAGCTTT TCTCCCTTTC AGGCTCCTCC CTCATTGTCG CACCTTATCG CGACCAGGAT 
TCCCGTGTGA TCGGCGCTCT CGGCATCATC GGCCCGACGC GCCTTAACTA CGCGAGAATT 
GTGCCGATGG TGGACTATAC GGCCCAGCTG GTGGGCCGCC TGCTTCGCTG A 

 

Protein sequence

MTKPVADQSL QSLDARSRDI FRLIVESYLQ RGEPVGSRNL SRLLPTQLSP ATIRNVMSDL 
EHLGLIYAPH VSAGRLPTQQ GLRFFVDAFM EVGDLSEEER RVIEAQIKAS GRGQSLDHML 
TEASQMLSGL SRGAGLVLAA KTEAPLKHIE FIQLEPRKAL AILVSQNGDV ENRVIELPAG 
VTASQLVEAS NFLNAHIRGR TLAEAKSEMA RLKEETREAL DSLSQSLVEQ GLAIWAGAES 
DTPARIIIRG RANLLENVTA QADLELLRHL FDDLETKEAL IQLLGLAEEG PGVRIFIGSE 
NKLFSLSGSS LIVAPYRDQD SRVIGALGII GPTRLNYARI VPMVDYTAQL VGRLLR