Gene Meso_3688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3688 
Symbol 
ID4180872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3977363 
End bp3978682 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content61% 
IMG OID638069581 
Producthomoserine dehydrogenase, NAD-binding 
Protein accessionYP_676221 
Protein GI110636013 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4091] Predicted homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACCA ATGTAGCGCT TGTTGGGCTC GCGCGTGATC TGGAAGAGCG CGCCAAAGCG 
GGGAAGCCCA TCCGAATCGG CCTGATTGGT ACGGGCGAAA TGGGTACCGA CATTGTCGCG
CGCATCTCCC ATATGCGGGG GATCGAGGTG GGTGCGATCG CCGAGTTGCG ACCGAAGGCC
GCGCTTCAGG CAGTCGAAAT CGCCTATGGC GAACCGGATC GTGCAAGGAC CGTCGACAGC
GGTGCAGCGA TGGCACGGGC GATCGAGGCG GGGCGCATTG CCGTTACGGA CGATGCAAGT
CACGTCATCG AAAGCGATCT TATCGATGTC GTCGTGGATG CTACCGGCGT TCCGGCTGTC
GGTGCTGAAA TCGGCCTTCG CGCGATGGAG CGCGGCAAGC ATCTCGTCAT GATGAATGTC
GAGGCGGACG TTACCATCGG AGCCTATCTC AAGAACGAAG CCGACCGGCT GGGTGTCACC
TACTCGCTCG GCGCGGGCGA TGAGCCTTCC GCCTGCATGG AACTGATCGA ATTCGTTTCT
GCGATGGGCC ACACCATCGT CGCGGCGGGT AAAGGCAAGA ACAACCCGCT AAATATCGAT
GCCGTTCCGG ACGATTATGC CGCCGAAGCC GAGCGGCGGA ACATGAATGT TCGCATGCTG
GTGGAATTCG TCGATGGCTC CAAAACGATG GTGGAAATGG CGGCGATCGC GAACGCCACG
GGTCTCGTTC CCGACAAGCC AGGCATGCAC GGGCCGGCCG CCACTCTGGG TGAACTCAAC
CGGACTCTGA TTCCGCAGAA AGATGGTGGG GTGCTCTCGC GCGCCGGCGT TGTGGATTAC
TCGATTGGAA AGGGGGTCGC GCCGGGCGTC TTCGTCATCG CCGAAATGTC GCATCCGCGC
ATCCGTGAAC GCATGGAAGA CCTGAAAATG GGAGAGGGGC CTTATTTTAC CTTCCATCGG
CCCTACCACC TCACGTCACT GGAGGTGCCG CTCACCTGTG CCCGAGTCGT TCTTTATGGC
AAGCCGGACA TGGTGCCGCT TCCCAAGCCG GTGGCTGAAG TTTGCGCAGT GGCGAAGAAG
GACCTCAACG TTGGCGAGAG GCTCGATGCC ATAGGGGAGT ACTGTTATCG CGCTTGGATC
ATGAGGGCCG AGGAAGCCAG GTCGGCCAAA GCCATACCCT GCGGACTCTT GCAAGGCGGC
ACGGTGTTGA AGCCTGTTCG CAAGGGTGAA ATTCTCACCT ACGATAACGC CGCGCCACCG
CCGGACTCCA AGATCGCCGA GCTGCGGGCT CGACAGGACA GGCTGATCAA CAAAACGTGA
 
Protein sequence
MVTNVALVGL ARDLEERAKA GKPIRIGLIG TGEMGTDIVA RISHMRGIEV GAIAELRPKA 
ALQAVEIAYG EPDRARTVDS GAAMARAIEA GRIAVTDDAS HVIESDLIDV VVDATGVPAV
GAEIGLRAME RGKHLVMMNV EADVTIGAYL KNEADRLGVT YSLGAGDEPS ACMELIEFVS
AMGHTIVAAG KGKNNPLNID AVPDDYAAEA ERRNMNVRML VEFVDGSKTM VEMAAIANAT
GLVPDKPGMH GPAATLGELN RTLIPQKDGG VLSRAGVVDY SIGKGVAPGV FVIAEMSHPR
IRERMEDLKM GEGPYFTFHR PYHLTSLEVP LTCARVVLYG KPDMVPLPKP VAEVCAVAKK
DLNVGERLDA IGEYCYRAWI MRAEEARSAK AIPCGLLQGG TVLKPVRKGE ILTYDNAAPP
PDSKIAELRA RQDRLINKT