Gene Meso_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3553 
Symbol 
ID4181801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3827254 
End bp3827733 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content55% 
IMG OID638069447 
Productendoribonuclease L-PSP 
Protein accessionYP_676088 
Protein GI110635880 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.405643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATGT CCCGAATGGC CTTGGGAGTA GCCTTGGCTA GCCTGTTCGC GCCGAGCGTA 
GAGGCGCTTG AAGTTGAACG ACACACTTAC TCCGAGTGGA CGCGCACGAG GTTTTCCGAG
TCTGTAACCG TGAAAGGACC CGGCAAGTTT ATTTTCCTGG CCGGTGTCGG GGCGGAGGAC
CATACCGAAA CCGAGGACAA GAGCGCGGCT ATCCTGCATC TCGGCGATCC ATACAAGCAG
TGCGTCTACG CATATGAGAA GATCAAGACG AAGTTGGCCG ACCAGGGTGC GACGCTTGCC
GACGTCGTTA AGCAAGTCGT TTACGTCAAC GATATTCGTT ATCAAGGACC TGTGGCGCAA
TGCCGGAGGG AGGCATACGG GGACATGCCT ATTCCTGCAA ACACATTTCT TGTGGTGAGC
GGATTTGCAA TTCCCGGAAT GCTGCTCGAG ATCGACGTAA CTGCGGTAGT TCCGGAATAG
 
Protein sequence
MRMSRMALGV ALASLFAPSV EALEVERHTY SEWTRTRFSE SVTVKGPGKF IFLAGVGAED 
HTETEDKSAA ILHLGDPYKQ CVYAYEKIKT KLADQGATLA DVVKQVVYVN DIRYQGPVAQ
CRREAYGDMP IPANTFLVVS GFAIPGMLLE IDVTAVVPE