Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3333 |
Symbol | |
ID | 4181710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3605453 |
End bp | 3606586 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638069226 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_675869 |
Protein GI | 110635661 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGC TGAAATTCCA CAAGATCGCA GCAATAGTGG TGCTCGTCGC AACGGCAGGC TGGATTGCCA CCGGCCAATT TTCCTCAGTG GGCAGCGCCA GAGAGGAGGC GAAGCCCGCA GGCGCCGAGC CGGATCGCCC TGTCGTTTTG AAGACGGTGC AGGTCGCAGT GCCGCCGCGG GTTGAGCACG CGCGCACCAT CCATGTCTCG GGACGGACAG AGGCGGACAA GAACGTAAAT CTAGCGGCGC GCGTCGCCGG AATCGTGGAA GAATTGCCTG TCGAGGAAGG CTCCCGTGTG AAGGAGGGGG ACCTGATCCT GCGCCTCGAA AACGAAGGCA AGGAGGCGGC TGTGACATCG GCGCAGCAGA CGCTTGCCCA CAGAGAGGCT GAATTTGCCG CGGCGGAACG GCTTTCCAAG AGTGGCAATC TCGCCAGCCT GCAGCTCGAT GTCGCGCGCG CCAATCTGGC CGCCGCCCGC TCGGCCCTGG AGCAGGCGAA GGCCGAACTC GACCGCGTCT CGGTGCGCGC GCCATTCGAT GCGGTGGTGG ACAAAATTCA AGTCGAAAAG GGCACCGCCG CCATGCAGGG CGCGGAAGTG GCCACTCTCC TGAAGCTCGA TCCCATCGTG GCCGCGGGCG AGGTGAGCGA GCGCGATCTC GGCACGATCA GGCCGGGTGA CAAGGCCGAG GTGCGCCTGG TCAATGGCGA GACGCTTTCC GGCACGATTC GCCATGTGAG CCGCGCCGCT TCCCCGCAGA CGCGTACCTA TCGGATCGAA GTCGTTGCTC CCAATCCGGA CAACGGCATC CCCGCAGGAA TGACGGCGGA AATCAGCATC AAGACGGAGA TGGTGGAAAC CGTAGCGCTG CCGCGGTCCG TCATCACGCT CAGCAACAAC GGAGAACTTG GCGTCCGCGC CGTGGATGAG GCCGCCCAGG TGCATTTCTA CCCGATCGAT ATCGTGGATG ATACGCCCGA AGCGCTCTAT CTGGCCGGCA TACCGCAGGA AATGCGCATC ATTGTCGCCG GCCAGGACCT CGTGACCGAC GGAGAGAAGG TGAAGGCGGA AGAGGCAGAC GCCGCTACCA TCCGTGAGCT CGCCAGCGCG GCGCGGCCAC AGCAAGAGCA ATGA
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Protein sequence | MAKLKFHKIA AIVVLVATAG WIATGQFSSV GSAREEAKPA GAEPDRPVVL KTVQVAVPPR VEHARTIHVS GRTEADKNVN LAARVAGIVE ELPVEEGSRV KEGDLILRLE NEGKEAAVTS AQQTLAHREA EFAAAERLSK SGNLASLQLD VARANLAAAR SALEQAKAEL DRVSVRAPFD AVVDKIQVEK GTAAMQGAEV ATLLKLDPIV AAGEVSERDL GTIRPGDKAE VRLVNGETLS GTIRHVSRAA SPQTRTYRIE VVAPNPDNGI PAGMTAEISI KTEMVETVAL PRSVITLSNN GELGVRAVDE AAQVHFYPID IVDDTPEALY LAGIPQEMRI IVAGQDLVTD GEKVKAEEAD AATIRELASA ARPQQEQ
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