Gene Meso_3259 details

Gene Information

• Locus tag: Meso_3259
• Symbol: tbpA
• ID: 4183232
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 3522309
• End bp: 3523307
• Gene Length: 999 bp
• Protein Length: 332 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 638069152
• Product: thiamine transporter substrate binding subunit
• Protein accession: YP_675796
• Protein GI: 110635588
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4143] ABC-type thiamine transport system, periplasmic component
• TIGRFAM ID: [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily; [TIGR01276] thiamine ABC transporter, periplasmic binding protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.288476
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACAGAA CAGCTCTCCT TGCGGCCCTG GCTTTGGGCA TGGCGGCAGT TCCCGCCTCG 
GCCCAGGAAA AGCTCACCGT CTACACCTAT GAAAGCTTCA CCGCCGAATG GGGGCCTGGC 
CCCGTGGTGG AAACGGCCTT TGAAGCCGAA TGCGGCTGCG ATCTCGAATT CGTCTCGGTT 
GCCGATGGCG TTGCCCTGCT CAACCGCCTG AGACTTGAGG GCGAAGGCAC CGAAGCGGAC 
ATCGTCCTCG GGCTGGATAC GAACCTTACC CATGAGGCGA AGGAAACCGG CCTTTTCGCG 
CCGCATGGGA TCGAACTCGG CAATGTCGAT GTGCCCGGCG GATTCCAGGA CGACGTGTTC 
GTGCCCTATG ACTACGGCTA TTTTGCCTTC GTCTACGACA CGCAAGCACT GGAAAACCCG 
CCGACGAGCC TGCGCGATTT GGTGGAGAGC GGCAGCGATC TCAAGATTGC GATCCAGGAC 
CCGCGTACCT CCACGCCGGG TCTTGGCCTG CTTCTCTGGA TCAAGGCGGT CTATAAGGAC 
GATGCGGCGG ATGCCTGGGG CAAACTCAAG AACAATGTGC TGACCGTGAC CCCCGGCTGG 
AGCGAATCCT ACGGGCTTTT CACCAGCGGG GAAGTGCCGA TGGTGCTGTC CTACACGACA 
TCGCCTGCCT ATCATGAGAT CGCTGAGGGA ACCCAGCGTT ACAAGGCCGC GGCTTTTTCC 
GAGGGCCACT ACCTTCAAAT CGAGGTGGCC GCGCGCACGG CGAGAGCCAA GGACAACCCG 
CTGGCGGCGC AATTCCTTTC CTTTATGACC GGCCCCGGCT TCCAGGATGC CATACCGGAG 
AAGAACTGGA TGTTTCCCGC CGGCAAGACC TCCGAGCCGC TTGACCCGGT GTTCCGGCAA 
CTGGTCCAGC CAGCAACAAC GCTTCTGTTC TCGCCCGAGG AAGTCGCTGA GAACCGCAAG 
GCCTGGGTTG ACGAGTGGCT GGCCGTGATG AGCCGGTGA 

 

Protein sequence

MHRTALLAAL ALGMAAVPAS AQEKLTVYTY ESFTAEWGPG PVVETAFEAE CGCDLEFVSV 
ADGVALLNRL RLEGEGTEAD IVLGLDTNLT HEAKETGLFA PHGIELGNVD VPGGFQDDVF 
VPYDYGYFAF VYDTQALENP PTSLRDLVES GSDLKIAIQD PRTSTPGLGL LLWIKAVYKD 
DAADAWGKLK NNVLTVTPGW SESYGLFTSG EVPMVLSYTT SPAYHEIAEG TQRYKAAAFS 
EGHYLQIEVA ARTARAKDNP LAAQFLSFMT GPGFQDAIPE KNWMFPAGKT SEPLDPVFRQ 
LVQPATTLLF SPEEVAENRK AWVDEWLAVM SR