Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3148 |
Symbol | |
ID | 4183101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3417433 |
End bp | 3418320 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638069041 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_675685 |
Protein GI | 110635477 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTTCTGT GGCCAGCAAT CAAGAGCGTC ACACGCGGGC AGAAGGCGCG GGATGCGGTT GCGGCCCACG ATCTGATCAC CGCGCGGATC GAGACGGCCA GTGCACTCAA CTACGCGCAT TATACGGTCG GCTTTGCCGC CCTCTTCGTG GTGGTCATCG CCCTTGCGCA GTTTCTGATG GCGAACAATC TCGCCGTCAG CCGCACCTTC CTGTCCGTAC CGCTGCTCGA CCTGTCGTTT CCCCTCATCC TGAAGGCGTT CTGGGTCAAT ATCTATATCT TCGTCGTAGC CGAAATATGC GTCCTCGTCT GGGGCCTGAT CGTCGCGGTG GCGCGGCTCA TCCCCGGCAA AACGGCCGCA CCAATCCGGG CGATCGCAAC GCTCTATACC GACATTTTCC GCGGTATGCC CGCGATCATC ACGATTTACC TGATCGGGTT CGGCCTGCCG CTGAGCGGCC TGCCGATCCT CAAGGATCTT TCGGTCGAGA CCTATGCCAT CATCGCATTG ACGCTTACCT TCGGCGCCTA TGTCGCCGAG GTCTACCGCG CCGGCATCGA AAGCATTCAC TGGAGCCAGG TGGCCGCCGC CCGTTCGCTC GGCCTCACCT ACATGCAGAC GATGCGCTAC GTCATTGTGC CCCAGGCGGT GCGCCGTATC GTCCCGCCGC TTCTTAACGA TTTCATCGGC CTGCAGAAGG ATACCGCTCT CGTTAACGTC ATCGGCTCCA TCGATGCCTT CAACCAGGCG AAGATCCTAT CGAGCAACTA TTTCAACCTC TCGCCCGTCA CCGTGGTGGC CTTCCTCTTC GTGGTAATCA CCATTCCGCA GGCCCGGTTC GTTGACCGGA TACTCGAAAG GGAGCAGCGG CGCACGCGCG CCGGGTAA
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Protein sequence | MLLWPAIKSV TRGQKARDAV AAHDLITARI ETASALNYAH YTVGFAALFV VVIALAQFLM ANNLAVSRTF LSVPLLDLSF PLILKAFWVN IYIFVVAEIC VLVWGLIVAV ARLIPGKTAA PIRAIATLYT DIFRGMPAII TIYLIGFGLP LSGLPILKDL SVETYAIIAL TLTFGAYVAE VYRAGIESIH WSQVAAARSL GLTYMQTMRY VIVPQAVRRI VPPLLNDFIG LQKDTALVNV IGSIDAFNQA KILSSNYFNL SPVTVVAFLF VVITIPQARF VDRILEREQR RTRAG
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