| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3056 |
|---|
| Symbol | |
|---|
| ID | 4180673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3331096 |
|---|
| End bp | 3332259 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638068948 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_675593 |
|---|
| Protein GI | 110635385 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATTG TGAACCGAGC TGCTGAACTT CAAGGTGAGG TCACCGAGTG GCGCCGGCAA
TTGCATCGCA ACCCGGAACT CCTCTTCGAC GTGAACGAAA CCGCCGCTTT CGTGAGCGAC
AAGCTTCGTG AGTTCGGTTG CGATGAGGTG GTGACGGGAC TCGGACGCAC GGGGGTGGTC
GGCATCATTC GCGGCAGCCG CGGCGCAGGC CCGTGCATCG GTCTGCGCGC CGATATGGAT
GCATTGCCGC TTCAGGAGGC GGTCGATCGG CCTTATGCTT CTGCAGTTCC GGGCCGCATG
CACGCCTGCG GGCATGATGG CCACACCGCG ATGTTGCTGG GCGCCGCCAA ATATCTCGCC
GAGACGCGCA ATTTCGTGGG AACCGCTGCC GTTATTTTTC AGCCCGCCGA GGAAGGCGGT
GGCGGCGGGA ACGAGATGGT GAAAGACGGC ATGATGGAGC GCTTCGGGAT CACGCGCGTC
TTCGGCATGC ACAATTTGCC TGGCATGCCG GTCGGGCATT TCGGCATCAG GCCTGGGCCC
ATCATGGCCT CGACCGCGGA GTTCAACATC GTCGTTGAGG GTAAGGGCGG TCACGCAGCC
ATGCCGCATA AGACAATCGA TCCCGTTGTG ACCGCCGCGC AGATCGTCAT GGGCCTTCAG
ACCATCGCCG CAAGATCGGC GGATCCGCTC GAATCCGTCG TCGTTTCGGT CACCAAGTTC
CATGGTGGCG ATGCGCACAA CATCATTCCC GACAGAGTCG AGATGGCAGG GACGATTCGG
ACGCTTAAAG GAGAGGTAAG CTTGCTTGCC GAAGGGCGCC TGCGCACGAT CGCGGAAGGT
ATTGCCCATG CCCATGGGGC GAAGGTGGCG ATCGATTATG ATCCGAACTA TCCCGTGACC
GTAAATAATC AGGCGGAAGC CGAATTTGCC GCACAGGTGG CTGTCGCCGT GGCGGGAGCG
GCCAATGTGG CCACCGATGT CCCACCCCTG ATGGGTGGCG AGGATTTCTC CTACATGCTG
CTGGCCCGGC CCGGCTGTCT CATCTTCATC GGAAACGGCG ATAGCGCCGG CCTGCACAAT
CCCTCCTACG ACTTCAACGA CGAAGCCATT CCATATGGGA TCAGCTATTG GGTTCGGTTG
GTGGAAAGTG CGCTTCCAGC GTGA
|
|---|
| Protein sequence | MPIVNRAAEL QGEVTEWRRQ LHRNPELLFD VNETAAFVSD KLREFGCDEV VTGLGRTGVV
GIIRGSRGAG PCIGLRADMD ALPLQEAVDR PYASAVPGRM HACGHDGHTA MLLGAAKYLA
ETRNFVGTAA VIFQPAEEGG GGGNEMVKDG MMERFGITRV FGMHNLPGMP VGHFGIRPGP
IMASTAEFNI VVEGKGGHAA MPHKTIDPVV TAAQIVMGLQ TIAARSADPL ESVVVSVTKF
HGGDAHNIIP DRVEMAGTIR TLKGEVSLLA EGRLRTIAEG IAHAHGAKVA IDYDPNYPVT
VNNQAEAEFA AQVAVAVAGA ANVATDVPPL MGGEDFSYML LARPGCLIFI GNGDSAGLHN
PSYDFNDEAI PYGISYWVRL VESALPA
|
|---|
| |