Gene Meso_2980 details

Gene Information

• Locus tag: Meso_2980
• ID: 4181416
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 3239893
• End bp: 3240528
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 638068864
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_675517
• Protein GI: 110635309
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1174] ABC-type proline/glycine betaine transport systems, permease component

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGTTA TCGATGCTTT TGGCTGGATT GCTGGCAATT TGCCGACCTT CTTCAAGGCC 
TTTTATCAGC ATCTCTTCAT GAGCCTGGTG TCACTGGGAA TCGCGGCGGT AATCGCTATC 
CCGACAGGCT TTTCAGTTGC GCGCTCACCA AGAATAGCCT TCTTTATCAT TAACGTGGCC 
GGTGCCGTCC GTTCGATCCC CAGCCTGGCT ATTCTGTCGG CCGCGCTTCC GATCTTGGGC 
ATCGGCATCG CGCCGTCCAT CGTGGCGCTG GTAGTACTCG CCATCCCTCC ATTGCTGCTC 
AACACAATCA CGGGTGTGCG TGAGATCGAC GTGTCGGTGC TCGACGCTGC AAACGGCATG 
GGAATGGGAC GCCAGGATAT CTTGTGGCAA ATCGAGGTGC CGCTCGCGAC ACCGGCGATC 
ATAACGGGCG TGCGGACGGC TGCGATTCAG GTGATCGGGG GGGCTGCCCT TGCTTCCTTT 
ATCGGCGGTG GCGGTCTTGG AGATTTCATC AATACCGGGA TCGCGATTAT GGATCTCCCG 
CGTCTTTTGG TCGGAGCAAT CCCCATCGCC CTGCTTTCGA TCTGTGCTGA AATTGGCTTT 
GGCCGGCTTG AACGTGCGCT AAAGACCAAA CGATAG 

 

Protein sequence

MIVIDAFGWI AGNLPTFFKA FYQHLFMSLV SLGIAAVIAI PTGFSVARSP RIAFFIINVA 
GAVRSIPSLA ILSAALPILG IGIAPSIVAL VVLAIPPLLL NTITGVREID VSVLDAANGM 
GMGRQDILWQ IEVPLATPAI ITGVRTAAIQ VIGGAALASF IGGGGLGDFI NTGIAIMDLP 
RLLVGAIPIA LLSICAEIGF GRLERALKTK R